The 2.0 version of rSNPBase

Variant report

Variant rs6604030
Chromosome Location chr1:93398336-93398337
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr1:93376000-93400400 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:93377000-93401400 Weak transcription Dnd41 blood
4 chr1:93384800-93399200 Weak transcription Fetal Intestine Small intestine
5 chr1:93387200-93400400 Weak transcription Left Ventricle heart
6 chr1:93388200-93408800 Weak transcription Pancreas Pancrea
7 chr1:93389600-93398400 Weak transcription HMEC breast
8 chr1:93390200-93399200 Weak transcription Adipose Nuclei Adipose
9 chr1:93390400-93402200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:93390600-93399200 Weak transcription Fetal Heart heart
11 chr1:93391200-93408800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr1:93392000-93401200 Enhancers Primary B cells from peripheral blood blood
13 chr1:93393000-93399200 Weak transcription Fetal Brain Male brain
14 chr1:93395000-93407200 Weak transcription Small Intestine intestine
15 chr1:93395200-93400200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:93395200-93401000 Enhancers Primary B cells from cord blood blood
17 chr1:93395400-93408800 Weak transcription Stomach Mucosa stomach
18 chr1:93395600-93398400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:93395600-93400000 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:93395600-93400000 Weak transcription NH-A brain
21 chr1:93395600-93400400 Weak transcription Fetal Thymus thymus
22 chr1:93395800-93398400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:93395800-93398400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:93395800-93398400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:93395800-93398400 Weak transcription Brain Cingulate Gyrus brain
26 chr1:93395800-93398400 Weak transcription NHEK skin
27 chr1:93395800-93399000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:93395800-93399000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:93395800-93399000 Weak transcription Liver Liver
30 chr1:93395800-93399000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:93395800-93399000 Weak transcription Brain Substantia Nigra brain
32 chr1:93395800-93399200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:93395800-93399200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:93395800-93399200 Weak transcription A549 lung
35 chr1:93395800-93399400 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr1:93395800-93399400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr1:93395800-93399400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:93395800-93399600 Weak transcription Muscle Satellite Cultured Cells --
39 chr1:93395800-93400000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr1:93395800-93400200 Weak transcription Aorta Aorta
41 chr1:93395800-93400200 Weak transcription Psoas Muscle Psoas
42 chr1:93395800-93400400 Weak transcription Gastric stomach
43 chr1:93395800-93400600 Weak transcription Thymus Thymus
44 chr1:93395800-93405200 Weak transcription Ovary ovary
45 chr1:93395800-93408800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:93396000-93398400 Weak transcription NHDF-Ad bronchial
47 chr1:93396000-93398800 Weak transcription NHLF lung
48 chr1:93396000-93398800 Weak transcription Osteobl bone
49 chr1:93396000-93399400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr1:93396200-93398400 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015