Variant report

Variant	rs6765761
Chromosome Location	chr3:17031607-17031608
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs17272789	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4452307	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56386177	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57955299	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61413357	0.85[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs62245974	1.00[ASN][1000 genomes]
rs6442662	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6773420	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73145323	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73146928	1.00[ASN][1000 genomes]
rs73151352	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73151357	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73153248	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73153264	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73816262	1.00[ASN][1000 genomes]
rs7614547	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7649318	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17014800-17033600	Weak transcription	Primary T cells from cord blood	blood
2	chr3:17014800-17038800	Weak transcription	Primary B cells from cord blood	blood
3	chr3:17016400-17032200	Weak transcription	Primary B cells from peripheral blood	blood
4	chr3:17020400-17034000	Weak transcription	Small Intestine	intestine
5	chr3:17024200-17034200	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr3:17024800-17033400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr3:17025400-17033800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:17026800-17041200	Enhancers	Primary T helper cells PMA-I stimulated	--
9	chr3:17027200-17033800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr3:17027200-17033800	Weak transcription	Fetal Heart	heart
11	chr3:17027200-17035400	Weak transcription	Fetal Brain Female	brain
12	chr3:17027400-17032800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
13	chr3:17027600-17032400	Weak transcription	Right Ventricle	heart
14	chr3:17027600-17033800	Weak transcription	Gastric	stomach
15	chr3:17027600-17034000	Weak transcription	Right Atrium	heart
16	chr3:17027800-17034400	Weak transcription	Ovary	ovary
17	chr3:17028000-17031800	Weak transcription	Primary T cells fromperipheralblood	blood
18	chr3:17028400-17039600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
19	chr3:17028800-17031800	Weak transcription	Pancreas	Pancrea
20	chr3:17028800-17031800	Weak transcription	Psoas Muscle	Psoas
21	chr3:17029000-17032400	Weak transcription	Left Ventricle	heart
22	chr3:17029000-17033800	Weak transcription	Spleen	Spleen
23	chr3:17029000-17034000	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr3:17029000-17034400	Weak transcription	Sigmoid Colon	Sigmoid Colon
25	chr3:17029200-17034400	Weak transcription	Skeletal Muscle Male	skeletal muscle
26	chr3:17029400-17034200	Weak transcription	Liver	Liver
27	chr3:17029400-17042200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
28	chr3:17030000-17032600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
29	chr3:17030000-17036200	Weak transcription	Primary hematopoietic stem cells	blood
30	chr3:17030200-17035800	Weak transcription	Brain Anterior Caudate	brain
31	chr3:17030200-17039200	Enhancers	Primary T helper naive cells from peripheral blood	blood
32	chr3:17030600-17034600	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr3:17030800-17031800	Weak transcription	Primary T helper cells fromperipheralblood	blood
34	chr3:17031200-17038200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
35	chr3:17031400-17032000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
36	chr3:17031600-17032200	Enhancers	Brain Substantia Nigra	brain
37	chr3:17031600-17035000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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