Variant report

Variant	rs73145323
Chromosome Location	chr3:17017618-17017619
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs17272789	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4452307	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56386177	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57955299	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61413357	0.83[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs62245974	1.00[ASN][1000 genomes]
rs6442662	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6765761	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6773420	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73146928	1.00[ASN][1000 genomes]
rs73151352	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73151357	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73153248	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73153264	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73816262	1.00[ASN][1000 genomes]
rs7614547	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7649318	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17009200-17026600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr3:17014800-17019600	Enhancers	Primary T helper cells PMA-I stimulated	--
3	chr3:17014800-17033600	Weak transcription	Primary T cells from cord blood	blood
4	chr3:17014800-17038800	Weak transcription	Primary B cells from cord blood	blood
5	chr3:17015000-17018000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
6	chr3:17015000-17019400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr3:17015600-17019000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr3:17015800-17017800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr3:17016000-17020000	Weak transcription	Aorta	Aorta
10	chr3:17016000-17020600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:17016200-17019800	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr3:17016200-17027200	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr3:17016400-17032200	Weak transcription	Primary B cells from peripheral blood	blood
14	chr3:17016600-17026600	Weak transcription	Fetal Heart	heart
15	chr3:17017000-17028600	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr3:17017000-17029800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr3:17017200-17019200	Weak transcription	Osteobl	bone
18	chr3:17017400-17018200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr3:17017400-17023200	Weak transcription	Primary T helper cells fromperipheralblood	blood
20	chr3:17017400-17026600	Weak transcription	Right Ventricle	heart
21	chr3:17017400-17027200	Weak transcription	Ovary	ovary
22	chr3:17017400-17027400	Weak transcription	Primary T cells fromperipheralblood	blood
23	chr3:17017400-17027400	Weak transcription	Right Atrium	heart
24	chr3:17017600-17019200	Weak transcription	Psoas Muscle	Psoas
25	chr3:17017600-17020000	Weak transcription	Adipose Nuclei	Adipose
26	chr3:17017600-17020000	Weak transcription	Pancreas	Pancrea
27	chr3:17017600-17021400	Weak transcription	Left Ventricle	heart
28	chr3:17017600-17022000	Weak transcription	Lung	lung
29	chr3:17017600-17023200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood

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