The 2.0 version of rSNPBase

Variant report

Variant rs6442662
Chromosome Location chr3:17067085-17067086
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17051600-17075000 Weak transcription Fetal Brain Male brain
2 chr3:17053200-17069000 Weak transcription Aorta Aorta
3 chr3:17053200-17069000 Weak transcription Fetal Lung lung
4 chr3:17053400-17072600 Weak transcription Ovary ovary
5 chr3:17053600-17071000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr3:17053600-17076200 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr3:17053600-17080600 Weak transcription Fetal Muscle Leg muscle
8 chr3:17053800-17068400 Weak transcription Adipose Nuclei Adipose
9 chr3:17053800-17086800 Weak transcription Fetal Stomach stomach
10 chr3:17055000-17077000 Weak transcription Fetal Brain Female brain
11 chr3:17055200-17072000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr3:17055400-17070600 Weak transcription Gastric stomach
13 chr3:17055400-17074200 Weak transcription Brain Anterior Caudate brain
14 chr3:17055400-17088800 Weak transcription Thymus Thymus
15 chr3:17055600-17079800 Weak transcription Small Intestine intestine
16 chr3:17055800-17087800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr3:17057400-17068400 Weak transcription Liver Liver
18 chr3:17057400-17076200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr3:17057600-17080600 Weak transcription Duodenum Mucosa Duodenum
20 chr3:17058200-17074000 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr3:17058600-17071600 Weak transcription Fetal Heart heart
22 chr3:17058600-17077000 Weak transcription Right Ventricle heart
23 chr3:17058600-17082400 Weak transcription Fetal Intestine Large intestine
24 chr3:17059800-17073000 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr3:17060000-17069000 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr3:17060000-17069000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr3:17060000-17069000 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr3:17060000-17070200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr3:17060000-17072800 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr3:17060000-17074600 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr3:17060000-17082200 Weak transcription Fetal Intestine Small intestine
32 chr3:17060000-17088600 Weak transcription Pancreas Pancrea
33 chr3:17060200-17081000 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr3:17061800-17073200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr3:17063600-17068600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:17064600-17069600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr3:17064600-17071400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr3:17064800-17067800 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr3:17064800-17069200 Weak transcription Primary B cells from cord blood blood
40 chr3:17064800-17071000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr3:17064800-17071400 Weak transcription Primary hematopoietic stem cells blood
42 chr3:17064800-17071400 Weak transcription Spleen Spleen
43 chr3:17065000-17071200 Weak transcription Stomach Mucosa stomach
44 chr3:17065200-17067800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr3:17065200-17068800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr3:17065600-17071000 Weak transcription Primary B cells from peripheral blood blood
47 chr3:17065600-17081200 Weak transcription Brain Inferior Temporal Lobe brain
48 chr3:17065800-17067600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr3:17065800-17067800 Strong transcription Primary monocytes fromperipheralblood blood
50 chr3:17065800-17070400 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015