Variant report

Variant	rs72890781
Chromosome Location	chr2:21201107-21201108
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs12713675	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12720770	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12720812	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12720813	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12720852	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12720855	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1437408	1.00[EUR][1000 genomes]
rs16988071	1.00[EUR][1000 genomes]
rs1866043	1.00[EUR][1000 genomes]
rs340605	1.00[EUR][1000 genomes]
rs340608	1.00[EUR][1000 genomes]
rs340614	1.00[EUR][1000 genomes]
rs548324	1.00[EUR][1000 genomes]
rs553687	1.00[EUR][1000 genomes]
rs571566	1.00[EUR][1000 genomes]
rs582107	1.00[EUR][1000 genomes]
rs59995050	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61072469	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61743299	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs642152	1.00[EUR][1000 genomes]
rs648568	1.00[EUR][1000 genomes]
rs662193	1.00[EUR][1000 genomes]
rs6759981	1.00[EUR][1000 genomes]
rs72654435	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72888848	1.00[EUR][1000 genomes]
rs72888854	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72888855	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72888859	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72890734	1.00[EUR][1000 genomes]
rs72890738	0.90[AFR][1000 genomes]
rs72890747	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72890758	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890763	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890771	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890775	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890778	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890784	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890789	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72890791	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72902534	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72902535	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72902538	1.00[EUR][1000 genomes]
rs72902540	1.00[EUR][1000 genomes]
rs72902541	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72902542	1.00[EUR][1000 genomes]
rs72902544	1.00[EUR][1000 genomes]
rs72902548	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73224614	1.00[EUR][1000 genomes]
rs73226544	1.00[EUR][1000 genomes]
rs73226553	1.00[EUR][1000 genomes]
rs73226559	1.00[EUR][1000 genomes]
rs839914	1.00[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21199000-21201200	Enhancers	Aorta	Aorta
2	chr2:21199200-21201200	Enhancers	Lung	lung
3	chr2:21199200-21201400	Enhancers	Fetal Muscle Leg	muscle
4	chr2:21199200-21201600	Enhancers	Adipose Nuclei	Adipose
5	chr2:21199400-21201400	Enhancers	Fetal Stomach	stomach
6	chr2:21200000-21206400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr2:21200200-21204400	Weak transcription	Spleen	Spleen
8	chr2:21200200-21207000	Weak transcription	Skeletal Muscle Female	skeletal muscle
9	chr2:21200400-21201200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr2:21200600-21201600	Enhancers	Fetal Kidney	kidney
11	chr2:21201000-21204400	Weak transcription	Stomach Smooth Muscle	stomach

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