Variant report

Variant	rs73029518
Chromosome Location	chr3:156704797-156704798
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:156704682..156706222-chr3:156712556..156714085,2	K562	blood:

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs11918032	1.00[EUR][1000 genomes]
rs11918873	1.00[EUR][1000 genomes]
rs11918949	1.00[EUR][1000 genomes]
rs11921057	1.00[EUR][1000 genomes]
rs11925276	1.00[EUR][1000 genomes]
rs1482867	1.00[EUR][1000 genomes]
rs16827190	1.00[EUR][1000 genomes]
rs16827209	1.00[EUR][1000 genomes]
rs4541362	1.00[EUR][1000 genomes]
rs56772168	1.00[EUR][1000 genomes]
rs56984599	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57454874	1.00[EUR][1000 genomes]
rs57676345	1.00[EUR][1000 genomes]
rs58897582	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59516322	1.00[EUR][1000 genomes]
rs61469347	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6441110	1.00[EUR][1000 genomes]
rs6774975	1.00[EUR][1000 genomes]
rs6778746	1.00[EUR][1000 genomes]
rs6788106	1.00[EUR][1000 genomes]
rs6789293	1.00[EUR][1000 genomes]
rs6791852	1.00[EUR][1000 genomes]
rs6793139	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73017741	1.00[EUR][1000 genomes]
rs73019707	1.00[EUR][1000 genomes]
rs73019709	1.00[EUR][1000 genomes]
rs73019730	1.00[EUR][1000 genomes]
rs73019732	1.00[EUR][1000 genomes]
rs73019733	1.00[EUR][1000 genomes]
rs73021795	1.00[EUR][1000 genomes]
rs73021801	1.00[EUR][1000 genomes]
rs73025844	1.00[EUR][1000 genomes]
rs73025863	1.00[EUR][1000 genomes]
rs73025882	1.00[EUR][1000 genomes]
rs73025895	1.00[EUR][1000 genomes]
rs73025901	1.00[EUR][1000 genomes]
rs73027741	1.00[EUR][1000 genomes]
rs73027753	1.00[EUR][1000 genomes]
rs73029521	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73029526	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7612563	1.00[EUR][1000 genomes]
rs7621847	1.00[EUR][1000 genomes]
rs7634624	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7645166	1.00[EUR][1000 genomes]
rs7652081	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829765	chr3:156568263-156718496	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3349885	chr3:156685409-156878910	Flanking Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:156704200-156705200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:156704200-156705400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr3:156704400-156704800	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr3:156704400-156705200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr3:156704600-156705200	Enhancers	HUES6 Cell Line	embryonic stem cell

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