Variant report

Variant rs7638808
Chromosome Location chr3:52572056-52572057
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52570000-52573600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr3:52570200-52572400 Active TSS Pancreatic Islets Pancreatic Islet
3 chr3:52570800-52572200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr3:52570800-52572200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr3:52570800-52572400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
6 chr3:52570800-52572400 Flanking Active TSS Adipose Nuclei Adipose
7 chr3:52570800-52572400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
8 chr3:52571000-52572200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr3:52571000-52572200 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
10 chr3:52571000-52572200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
11 chr3:52571000-52572400 Flanking Active TSS Primary T cells from cord blood blood
12 chr3:52571000-52572400 Flanking Active TSS Duodenum Mucosa Duodenum
13 chr3:52571000-52572400 Flanking Active TSS Fetal Brain Female brain
14 chr3:52571000-52572400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
15 chr3:52571000-52572400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
16 chr3:52571000-52572400 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr3:52571000-52573400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
18 chr3:52571200-52572200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
19 chr3:52571200-52572200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
20 chr3:52571200-52572200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
21 chr3:52571200-52572200 Flanking Active TSS Brain Germinal Matrix brain
22 chr3:52571200-52572200 Flanking Active TSS Brain Inferior Temporal Lobe brain
23 chr3:52571200-52572200 Flanking Active TSS Brain Substantia Nigra brain
24 chr3:52571200-52572200 Flanking Active TSS Fetal Lung lung
25 chr3:52571200-52572200 Flanking Active TSS Fetal Muscle Trunk muscle
26 chr3:52571200-52572200 Flanking Active TSS Stomach Mucosa stomach
27 chr3:52571200-52572200 Flanking Active TSS Thymus Thymus
28 chr3:52571200-52572400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
29 chr3:52571200-52572400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr3:52571200-52572400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
31 chr3:52571200-52572400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr3:52571200-52572400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr3:52571200-52572400 Flanking Active TSS Liver Liver
34 chr3:52571200-52572400 Flanking Active TSS Brain Anterior Caudate brain
35 chr3:52571200-52572400 Flanking Active TSS Brain Cingulate Gyrus brain
36 chr3:52571200-52572400 Flanking Active TSS Brain Hippocampus Middle brain
37 chr3:52571200-52572400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
38 chr3:52571200-52572400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
39 chr3:52571200-52572400 Flanking Active TSS Dnd41 blood
40 chr3:52571200-52572400 Flanking Active TSS Hela-S3 cervix
41 chr3:52571200-52572400 Flanking Active TSS HUVEC blood vessel
42 chr3:52571200-52572400 Flanking Active TSS NH-A brain
43 chr3:52571200-52572400 Flanking Active TSS Osteobl bone
44 chr3:52571200-52572800 Enhancers Spleen Spleen
45 chr3:52571400-52572200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:52571400-52572200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
47 chr3:52571400-52572200 Flanking Active TSS Colon Smooth Muscle Colon
48 chr3:52571400-52572200 Flanking Active TSS NHLF lung
49 chr3:52571400-52572400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
50 chr3:52571400-52572400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell

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