Variant report

Variant	rs2336146
Chromosome Location	chr3:52626646-52626647
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 273 )
Associated
traits (count: 20 )

rSNPs within LD-proxies of this variant (count:272)

rs_ID	r²[population]
rs1010552	0.84[CHB][hapmap]
rs1010553	0.82[CHB][hapmap];0.81[CHD][hapmap]
rs1010554	0.91[CHB][hapmap];0.84[CHD][hapmap]
rs1014969	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap]
rs1029871	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1042779	0.83[CHB][hapmap];0.86[JPT][hapmap];0.83[MEX][hapmap];0.82[MKK][hapmap];0.82[TSI][hapmap]
rs10433615	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10510760	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1075653	0.82[GIH][hapmap];0.86[JPT][hapmap];0.84[MKK][hapmap]
rs1076425	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs10780035	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10865973	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10865974	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10933	0.82[ASN][1000 genomes]
rs1108842	1.00[CHB][hapmap];0.93[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.91[LWK][hapmap];0.88[MKK][hapmap];0.96[YRI][hapmap]
rs11130307	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11130308	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130310	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11130311	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11130312	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130313	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130314	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11130315	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11130317	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11130318	0.81[EUR][1000 genomes]
rs11130319	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11130321	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11130323	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11130325	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11130326	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11130327	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11177	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11235	0.95[CHB][hapmap];0.83[JPT][hapmap];0.83[ASN][1000 genomes]
rs1133415	0.91[CHB][hapmap];0.93[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.91[TSI][hapmap];0.84[ASN][1000 genomes]
rs11708075	0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11709448	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11711421	0.95[JPT][hapmap]
rs11714030	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11714088	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11714419	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11714565	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11716747	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11717043	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11717836	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11718420	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11718509	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11719514	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11720159	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11720243	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11720432	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12486554	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12486847	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12487445	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12487591	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12488461	0.91[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.91[JPT][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12488527	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12489732	0.82[ASN][1000 genomes]
rs12489828	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs12493107	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12496476	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12496634	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12497998	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12498066	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12629699	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12629701	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12632265	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12632381	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12635140	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13059862	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13060048	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13060675	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13061253	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13061423	0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13063160	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.98[TSI][hapmap];0.93[YRI][hapmap];0.83[AFR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13064064	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13065019	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13065851	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13068293	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13069481	0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13071584	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes]
rs13074853	0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13076193	0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13076398	0.83[ASN][1000 genomes]
rs13078422	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13079063	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13081028	0.86[CHB][hapmap];0.86[CHD][hapmap]
rs13081031	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13081155	0.83[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs13082208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13082960	0.96[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13083798	1.00[CHB][hapmap];0.93[CHD][hapmap];0.91[JPT][hapmap];0.91[LWK][hapmap];0.88[MKK][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs13085331	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13085775	0.94[ASW][hapmap];0.84[CEU][hapmap];0.91[CHB][hapmap];0.93[CHD][hapmap];0.92[GIH][hapmap];0.91[JPT][hapmap];0.98[LWK][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13085895	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13086297	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13086898	0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13087772	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13095332	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13098776	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13303	0.95[CHB][hapmap];0.86[CHD][hapmap];0.91[JPT][hapmap]
rs13621	0.82[ASN][1000 genomes]
rs1468638	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1561337	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1570	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17052256	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17052259	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17264436	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1821879	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1866268	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1961958	0.91[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.81[ASN][1000 genomes]
rs1961959	0.91[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs2019065	0.83[CHB][hapmap];0.91[JPT][hapmap];0.87[MEX][hapmap];0.84[TSI][hapmap]
rs2028216	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2071506	0.82[GIH][hapmap];0.86[JPT][hapmap];0.84[MKK][hapmap]
rs2072390	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2079929	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2083180	1.00[ASW][hapmap];0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2109634	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2118540	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2159644	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2164884	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2164885	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2230535	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap]
rs2239549	0.86[JPT][hapmap];0.82[TSI][hapmap]
rs2239551	0.86[JPT][hapmap];0.82[MEX][hapmap];0.82[TSI][hapmap]
rs2251219	0.96[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.85[ASN][1000 genomes]
rs2268023	0.86[JPT][hapmap]
rs2268025	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2268026	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2268027	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2270197	0.86[JPT][hapmap]
rs2276824	1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2286798	0.82[GIH][hapmap];0.91[JPT][hapmap];0.81[TSI][hapmap]
rs2286800	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2289247	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2289249	0.91[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.93[TSI][hapmap];0.85[ASN][1000 genomes]
rs2289250	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2300149	0.82[GIH][hapmap];0.86[JPT][hapmap];0.83[MEX][hapmap];0.82[TSI][hapmap]
rs2336145	0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2336148	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2336149	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2336542	0.95[CEU][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2336545	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2577831	1.00[CHB][hapmap];0.93[CHD][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs2590838	1.00[CHB][hapmap];0.93[CHD][hapmap];0.86[GIH][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs2590846	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2878628	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2878726	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs33964154	0.85[ASN][1000 genomes]
rs33967311	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34005367	0.81[ASN][1000 genomes]
rs34017441	0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34115864	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34157897	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34168767	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34173654	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34215106	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34291015	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34341238	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34537256	0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34610142	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34610878	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34739010	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34754793	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34757451	0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34918356	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34954168	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35107891	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35211965	0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35212380	0.84[ASN][1000 genomes]
rs35249778	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35315313	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35409678	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35526119	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35976524	0.97[ASN][1000 genomes]
rs3733039	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3733041	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3733045	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3755798	1.00[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.99[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3755806	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3774349	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs3774354	0.86[JPT][hapmap];0.83[MEX][hapmap];0.81[TSI][hapmap]
rs3774355	0.81[JPT][hapmap]
rs3774365	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3774366	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3796353	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3852066	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4130905	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4282054	0.95[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap]
rs4336110	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4435633	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4475032	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap];0.81[ASN][1000 genomes]
rs4687546	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4687547	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4687548	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4687549	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4687550	0.86[JPT][hapmap]
rs4687551	0.82[GIH][hapmap];0.81[JPT][hapmap]
rs4687625	0.95[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs4687626	0.95[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap];0.82[ASN][1000 genomes]
rs4687629	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4687630	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4687633	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4687636	0.86[TSI][hapmap];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4687637	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4687638	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4687639	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4687644	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4687648	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62253700	0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62253703	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62253733	0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62255362	0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62255364	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62255371	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62255396	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62256903	0.83[ASN][1000 genomes]
rs6414569	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6445528	0.83[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.96[MKK][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.84[ASN][1000 genomes]
rs6445529	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6445531	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6445534	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6445535	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6617	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs67539070	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6762457	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6762813	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6768697	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6770463	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6778329	0.90[JPT][hapmap]
rs6778735	0.95[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap]
rs6778844	0.91[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.85[ASN][1000 genomes]
rs678	0.91[JPT][hapmap]
rs6786043	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6786919	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.97[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6787154	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6788887	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6788993	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6790330	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6796726	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6798246	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs68021750	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6803012	0.91[CEU][hapmap];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6804145	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6805156	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6976	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs731831	0.82[CHB][hapmap];0.85[CHD][hapmap]
rs7611731	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7612511	0.87[ASN][1000 genomes]
rs7614498	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7614981	0.95[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap]
rs7620039	0.88[ASN][1000 genomes]
rs7622694	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7623199	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7624716	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7625743	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7628578	0.99[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7638162	0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7638808	0.89[ASW][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.84[ASN][1000 genomes]
rs7642198	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7646741	0.81[AFR][1000 genomes]
rs7652191	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7653028	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs767418	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8906	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9324	0.82[GIH][hapmap];0.86[JPT][hapmap]
rs9714129	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9758945	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9853056	0.86[CHB][hapmap];0.86[CHD][hapmap]
rs9879090	1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs9917834	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs998909	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv984563	chr3:52516115-52867075	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

mRNA abundance (count:20)

SNP	Gene	Cis/trans	Tissue	Source
rs2336146	GLT8D1	Cis_1M	lymphoblastoid	RTeQTL
rs2336146	PBRM1	cis	Thyroid	GTEx
rs2336146	PBRM1	cis	Artery Tibial	GTEx
rs2336146	NT5DC2	cis	Skin Sun Exposed Lower leg	GTEx
rs2336146	SPCS1	cis	parietal	SCAN
rs2336146	NT5DC2	cis	lymphoblastoid	seeQTL
rs2336146	NEK4	cis	cerebellum	SCAN
rs2336146	GNL3	cis	cerebellum	SCAN
rs2336146	GLT8D1	cis	lymphoblastoid	seeQTL
rs2336146	GLYCTK	cis	parietal	SCAN
rs2336146	TMEM110	cis	parietal	SCAN
rs2336146	NEK4	cis	parietal	SCAN
rs2336146	ITIH4	cis	parietal	SCAN
rs2336146	GNL3	cis	parietal	SCAN
rs2336146	MUSTN1	cis	Artery Aorta	GTEx
rs2336146	RBM6	cis	parietal	SCAN
rs2336146	NT5DC2	cis	multi-tissue	Pritchard
rs2336146	RBM6	cis	cerebellum	SCAN
rs2336146	NT5DC2	Cis_1M	lymphoblastoid	RTeQTL
rs2336146	FLJ12442	cis	multi-tissue	Pritchard

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52572400-52633000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:52585800-52627400	Weak transcription	Fetal Heart	heart
3	chr3:52587200-52719200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr3:52591000-52688000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr3:52592200-52719200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr3:52595200-52631000	Weak transcription	Stomach Mucosa	stomach
7	chr3:52612000-52634800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr3:52612800-52634800	Weak transcription	A549	lung
9	chr3:52613200-52630600	Weak transcription	Colonic Mucosa	Colon
10	chr3:52613200-52634000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr3:52613400-52626800	Weak transcription	Brain Cingulate Gyrus	brain
12	chr3:52613400-52630600	Weak transcription	Spleen	Spleen
13	chr3:52613400-52635000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
14	chr3:52613400-52635000	Weak transcription	Fetal Brain Male	brain
15	chr3:52613600-52627800	Weak transcription	Psoas Muscle	Psoas
16	chr3:52613600-52630600	Weak transcription	Gastric	stomach
17	chr3:52613600-52634600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
18	chr3:52613600-52635200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
19	chr3:52613600-52635200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr3:52613600-52635200	Weak transcription	H9 Cell Line	embryonic stem cell
21	chr3:52614000-52627200	Weak transcription	Brain Angular Gyrus	brain
22	chr3:52614200-52630600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr3:52614200-52634800	Weak transcription	Small Intestine	intestine
24	chr3:52614800-52628600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr3:52615600-52630600	Weak transcription	Pancreas	Pancrea
26	chr3:52615800-52630600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr3:52617000-52627000	Weak transcription	Brain Hippocampus Middle	brain
28	chr3:52617600-52630600	Weak transcription	NHLF	lung
29	chr3:52620600-52627200	Weak transcription	Brain Anterior Caudate	brain
30	chr3:52620600-52630600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr3:52620600-52631000	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr3:52620600-52634800	Weak transcription	Aorta	Aorta
33	chr3:52620800-52630800	Weak transcription	Lung	lung
34	chr3:52620800-52634800	Weak transcription	Esophagus	oesophagus
35	chr3:52620800-52635000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
36	chr3:52620800-52635000	Weak transcription	NHEK	skin
37	chr3:52621000-52628600	Weak transcription	Duodenum Smooth Muscle	Duodenum
38	chr3:52621000-52630800	Weak transcription	Rectal Mucosa Donor 31	rectum
39	chr3:52621600-52630800	Weak transcription	HepG2	liver
40	chr3:52621600-52635800	Weak transcription	Hela-S3	cervix
41	chr3:52622200-52634200	Weak transcription	HUVEC	blood vessel
42	chr3:52622200-52635000	Weak transcription	Ovary	ovary
43	chr3:52623000-52635200	Weak transcription	H1 Cell Line	embryonic stem cell
44	chr3:52623200-52627200	Weak transcription	Sigmoid Colon	Sigmoid Colon
45	chr3:52623200-52630400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr3:52623200-52634200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr3:52623200-52634200	Weak transcription	Skeletal Muscle Male	skeletal muscle
48	chr3:52623200-52634400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr3:52623200-52634800	Weak transcription	Rectal Smooth Muscle	rectum
50	chr3:52623200-52635400	Weak transcription	HMEC	breast

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