Variant report

Variant	rs9848254
Chromosome Location	chr3:134330374-134330375
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 168 )
Associated
traits (count: 22 )

rSNPs within LD-proxies of this variant (count:161)

rs_ID	r²[population]
rs10804632	0.82[EUR][1000 genomes]
rs10935120	0.84[CEU][hapmap];0.93[JPT][hapmap];0.80[YRI][hapmap]
rs10935123	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1138273	0.82[CEU][hapmap]
rs11708531	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs11915964	0.83[CEU][hapmap];0.86[EUR][1000 genomes]
rs11919350	0.85[CEU][hapmap]
rs11919458	0.82[EUR][1000 genomes]
rs11927539	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11927540	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12490835	0.83[CEU][hapmap]
rs12492930	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs12637301	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12637751	0.84[CEU][hapmap]
rs13064209	1.00[CEU][hapmap];0.83[CHB][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13071551	0.83[EUR][1000 genomes]
rs13075117	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13075253	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13076825	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13084192	1.00[CEU][hapmap];0.83[CHB][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13088413	0.83[EUR][1000 genomes]
rs13089566	0.81[CEU][hapmap];0.86[EUR][1000 genomes]
rs13096604	0.82[CEU][hapmap]
rs13098546	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13322305	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1357762	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs1357764	0.84[CEU][hapmap];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1404289	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1498718	0.84[CEU][hapmap];0.85[JPT][hapmap];0.80[YRI][hapmap]
rs1534025	0.81[CEU][hapmap];0.83[EUR][1000 genomes]
rs1534029	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1534030	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17694011	0.93[JPT][hapmap]
rs1814336	0.87[CEU][hapmap]
rs1814337	0.93[JPT][hapmap]
rs1863913	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs1874883	0.84[CEU][hapmap]
rs1880374	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1880375	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1880376	0.82[CEU][hapmap]
rs1880378	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1880379	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1917130	0.83[EUR][1000 genomes]
rs2056603	0.82[CEU][hapmap];0.93[JPT][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2056604	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2241556	0.84[CEU][hapmap]
rs2293293	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2293294	0.96[CEU][hapmap];1.00[CHB][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2887797	0.82[CEU][hapmap]
rs2888670	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4074521	0.96[CEU][hapmap];1.00[CHB][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4074522	0.96[CEU][hapmap];1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4074523	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4245903	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4245904	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4245905	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4245907	0.81[CEU][hapmap];0.81[YRI][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4245908	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4306899	1.00[CEU][hapmap];0.83[CHB][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4306900	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4318591	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4435681	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4435682	0.81[CEU][hapmap];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4437193	0.96[CEU][hapmap];0.84[YRI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4456908	0.96[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4498009	0.82[CEU][hapmap]
rs4519744	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4535271	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4539979	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs4543053	0.96[CEU][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4605591	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4634170	1.00[CEU][hapmap];0.83[CHB][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4955468	0.96[CEU][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4955485	0.82[EUR][1000 genomes]
rs4955525	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4955526	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4955534	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4955542	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4955544	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4955545	0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4955546	1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4955547	1.00[CEU][hapmap];0.83[CHB][hapmap];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4955548	0.81[YRI][hapmap];0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4955555	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs4974480	0.84[CEU][hapmap]
rs55835132	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56899746	0.80[EUR][1000 genomes]
rs58491661	0.86[EUR][1000 genomes]
rs62269560	0.83[EUR][1000 genomes]
rs6439484	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs6763088	0.82[CEU][hapmap]
rs6763188	0.80[CEU][hapmap];0.86[EUR][1000 genomes]
rs6764764	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6766897	0.81[CEU][hapmap]
rs6768323	0.85[CEU][hapmap]
rs6769885	0.93[JPT][hapmap]
rs6772896	0.84[CEU][hapmap]
rs6775611	0.83[CEU][hapmap];0.86[EUR][1000 genomes]
rs6779294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6779326	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6782563	0.82[EUR][1000 genomes]
rs6785027	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs6793487	0.82[EUR][1000 genomes]
rs6794258	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6804770	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs6805388	0.84[CEU][hapmap]
rs6806417	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs6806810	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7356093	0.84[CEU][hapmap]
rs7371896	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs7374325	0.82[CEU][hapmap]
rs7427492	0.85[CEU][hapmap]
rs7430034	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7433663	0.93[JPT][hapmap]
rs7433991	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7611611	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7619451	0.84[CEU][hapmap]
rs7623567	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7626557	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7630874	0.84[CEU][hapmap]
rs7633868	0.81[JPT][hapmap];0.93[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7641798	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7642266	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7648616	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7653807	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7653880	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9289471	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs9289476	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs9289478	0.88[CEU][hapmap];0.93[JPT][hapmap]
rs9809344	0.96[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9809619	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs9813774	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs9814567	0.84[CEU][hapmap]
rs9824185	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9828815	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs9835204	0.84[CEU][hapmap];0.93[JPT][hapmap]
rs9836401	1.00[CEU][hapmap];0.83[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9838119	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9838467	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9838621	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9838889	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9839705	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9841180	0.81[CEU][hapmap]
rs9841212	0.84[CEU][hapmap]
rs9841371	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9846111	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9847788	0.82[CEU][hapmap]
rs9851441	0.82[CEU][hapmap];0.93[JPT][hapmap];0.90[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9854299	0.82[CEU][hapmap]
rs9855013	0.81[CEU][hapmap];0.93[JPT][hapmap]
rs9857242	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9857995	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9864346	0.81[CEU][hapmap];0.93[JPT][hapmap];0.81[YRI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9871226	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9876658	0.84[CEU][hapmap]
rs9883753	0.83[CEU][hapmap]
rs9968172	0.84[CEU][hapmap]
rs9985341	0.82[CEU][hapmap];0.93[JPT][hapmap]
rs9985356	0.84[CEU][hapmap];0.93[JPT][hapmap];0.80[YRI][hapmap]
rs9989967	0.84[CEU][hapmap];0.93[JPT][hapmap];0.80[YRI][hapmap]
rs9990351	0.84[CEU][hapmap];0.93[JPT][hapmap];0.80[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877510	chr3:134126150-134400448	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
2	nsv877511	chr3:134174071-134358947	Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
3	nsv877512	chr3:134174071-134372486	Enhancers Strong transcription ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	nsv877513	chr3:134174071-134379752	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
5	nsv877514	chr3:134191938-134372486	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
6	nsv829730	chr3:134199097-134359544	Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
7	nsv1002382	chr3:134239191-134358001	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:22)

SNP	Gene	Cis/trans	Tissue	Source
rs9848254	ANAPC13	cis	Esophagus Mucosa	GTEx
rs9848254	ANAPC13	Cis_1M	lymphoblastoid	RTeQTL
rs9848254	CEP63	cis	Skin Sun Exposed Lower leg	GTEx
rs9848254	ANAPC13	cis	Artery Tibial	GTEx
rs9848254	CEP63	cis	Esophagus Muscularis	GTEx
rs9848254	ANAPC13	cis	normal skin	skin_eQTL
rs9848254	ANAPC13	cis	Nerve Tibial	GTEx
rs9848254	ANAPC13	cis	multi-tissue	Pritchard
rs9848254	CEP63	cis	lung	GTEx
rs9848254	CEP63	cis	Esophagus Mucosa	GTEx
rs9848254	ANAPC13	cis	Muscle Skeletal	GTEx
rs9848254	ANAPC13	cis	Thyroid	GTEx
rs9848254	CEP63	Cis_1M	lymphoblastoid	RTeQTL
rs9848254	ANAPC13	cis	lung	GTEx
rs9848254	ANAPC13	cis	uninvolved skin	skin_eQTL
rs9848254	CEP63	cis	Artery Tibial	GTEx
rs9848254	ANAPC13	cis	Heart Left Ventricle	GTEx
rs9848254	ANAPC13	cis	Adipose Subcutaneous	GTEx
rs9848254	ANAPC13	cis	lesional skin	skin_eQTL
rs9848254	ANAPC13	cis	Skin Sun Exposed Lower leg	GTEx
rs9848254	ANAPC13	cis	Stomach	GTEx
rs9848254	ANAPC13	cis	Esophagus Muscularis	GTEx

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134319600-134334600	Weak transcription	Aorta	Aorta
2	chr3:134319800-134353800	Weak transcription	Left Ventricle	heart
3	chr3:134320400-134338000	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr3:134321200-134335200	Weak transcription	Ovary	ovary
5	chr3:134321600-134336800	Weak transcription	Brain Anterior Caudate	brain
6	chr3:134321600-134349200	Weak transcription	Brain Substantia Nigra	brain
7	chr3:134321800-134337400	Weak transcription	Brain Cingulate Gyrus	brain
8	chr3:134321800-134337800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr3:134322200-134331200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr3:134322600-134331200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr3:134324800-134333200	Genic enhancers	Skeletal Muscle Female	skeletal muscle
12	chr3:134325200-134330400	Genic enhancers	Fetal Muscle Trunk	muscle
13	chr3:134325200-134331400	Genic enhancers	Fetal Muscle Leg	muscle
14	chr3:134325600-134332200	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr3:134326000-134364800	Weak transcription	Osteobl	bone
16	chr3:134326200-134340200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr3:134327000-134331400	Weak transcription	Lung	lung
18	chr3:134327200-134339000	Weak transcription	Spleen	Spleen
19	chr3:134327200-134340000	Strong transcription	Stomach Smooth Muscle	stomach
20	chr3:134327400-134338400	Weak transcription	Fetal Intestine Small	intestine
21	chr3:134328200-134368200	Weak transcription	Brain Angular Gyrus	brain
22	chr3:134328600-134333400	Enhancers	Skeletal Muscle Male	skeletal muscle
23	chr3:134328800-134331000	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr3:134329200-134331200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr3:134329400-134331000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr3:134329400-134331200	Weak transcription	Primary hematopoietic stem cells	blood
27	chr3:134329400-134336800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
28	chr3:134329400-134349000	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr3:134329600-134330600	Enhancers	Right Ventricle	heart
30	chr3:134329600-134330800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr3:134329600-134340000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
32	chr3:134329800-134331000	Weak transcription	Primary neutrophils fromperipheralblood	blood
33	chr3:134329800-134331400	Enhancers	Fetal Lung	lung
34	chr3:134329800-134332400	Enhancers	Psoas Muscle	Psoas
35	chr3:134330200-134356800	Weak transcription	Fetal Heart	heart

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