Variant report

Variant rs2241556
Chromosome Location chr3:134183312-134183313
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134169000-134183600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:134178400-134186400 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr3:134178600-134183600 Weak transcription Left Ventricle heart
4 chr3:134178600-134183800 Weak transcription Right Ventricle heart
5 chr3:134178600-134185000 Enhancers Adipose Nuclei Adipose
6 chr3:134179400-134184000 Enhancers HSMMtube muscle
7 chr3:134179400-134186400 Enhancers Fetal Muscle Leg muscle
8 chr3:134180000-134183800 Enhancers Brain Hippocampus Middle brain
9 chr3:134180000-134184000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr3:134180400-134184800 Enhancers Fetal Muscle Trunk muscle
11 chr3:134180600-134184200 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
12 chr3:134180800-134184000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:134180800-134184000 Enhancers Ovary ovary
14 chr3:134180800-134184600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr3:134180800-134186600 Enhancers Fetal Stomach stomach
16 chr3:134181000-134184000 Enhancers H1 Cell Line embryonic stem cell
17 chr3:134181000-134184000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:134181000-134184200 Enhancers Placenta Amnion Placenta Amnion
19 chr3:134181200-134184000 Enhancers Placenta Placenta
20 chr3:134181400-134185200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr3:134181400-134189400 Weak transcription A549 lung
22 chr3:134181400-134190400 Weak transcription Primary B cells from cord blood blood
23 chr3:134181600-134184000 Enhancers Duodenum Smooth Muscle Duodenum
24 chr3:134181800-134184000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr3:134181800-134184000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr3:134181800-134195000 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr3:134182000-134184000 Enhancers Muscle Satellite Cultured Cells --
28 chr3:134182000-134184000 Enhancers Brain Angular Gyrus brain
29 chr3:134182200-134184000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
30 chr3:134182200-134184200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr3:134182200-134190200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr3:134182400-134183400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
33 chr3:134182400-134183400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
34 chr3:134182400-134183600 Enhancers Cortex derived primary cultured neurospheres brain
35 chr3:134182400-134183800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:134182400-134184000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
37 chr3:134182400-134184000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:134182400-134184000 Enhancers Brain Cingulate Gyrus brain
39 chr3:134182400-134184200 Enhancers Brain Germinal Matrix brain
40 chr3:134182400-134185200 Enhancers Colon Smooth Muscle Colon
41 chr3:134182400-134195200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr3:134182600-134183400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
43 chr3:134182600-134183400 Weak transcription Psoas Muscle Psoas
44 chr3:134182600-134183600 Weak transcription H9 Cell Line embryonic stem cell
45 chr3:134182600-134183600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
46 chr3:134182600-134183800 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr3:134182600-134183800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr3:134182600-134183800 Enhancers Fetal Intestine Small intestine
49 chr3:134182800-134183400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr3:134182800-134183400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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