The 2.0 version of rSNPBase

Variant report

Variant rs2177601
Chromosome Location chr3:134245434-134245435
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134206600-134251600 Weak transcription Colonic Mucosa Colon
2 chr3:134213800-134246000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:134222000-134245800 Weak transcription H9 Cell Line embryonic stem cell
4 chr3:134224800-134245800 Weak transcription Pancreas Pancrea
5 chr3:134225000-134255800 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr3:134225200-134256200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr3:134230800-134251800 Weak transcription Aorta Aorta
8 chr3:134230800-134256000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr3:134231200-134255800 Weak transcription Placenta Placenta
10 chr3:134232600-134246000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr3:134236200-134256400 Weak transcription A549 lung
12 chr3:134236200-134267000 Weak transcription HSMM muscle
13 chr3:134237000-134256000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr3:134237000-134256200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:134237200-134246800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr3:134240800-134245600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
17 chr3:134241800-134245800 Weak transcription Gastric stomach
18 chr3:134242600-134251200 Weak transcription Primary monocytes fromperipheralblood blood
19 chr3:134242600-134251600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr3:134242600-134256200 Weak transcription NHEK skin
21 chr3:134243400-134246000 Weak transcription Thymus Thymus
22 chr3:134243600-134246200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
23 chr3:134244600-134251400 Weak transcription Dnd41 blood
24 chr3:134244600-134251600 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr3:134244800-134245600 ZNF genes & repeats Primary hematopoietic stem cells blood
26 chr3:134244800-134251200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr3:134244800-134251600 Weak transcription Liver Liver
28 chr3:134244800-134251800 Weak transcription Fetal Intestine Large intestine
29 chr3:134244800-134256000 Weak transcription Brain Hippocampus Middle brain
30 chr3:134244800-134269600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr3:134245000-134251800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr3:134245000-134253400 Weak transcription Fetal Muscle Leg muscle
33 chr3:134245000-134255800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr3:134245000-134255800 Weak transcription Fetal Intestine Small intestine
35 chr3:134245200-134245600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
36 chr3:134245200-134245800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr3:134245200-134245800 Weak transcription Esophagus oesophagus
38 chr3:134245200-134246200 Weak transcription Primary T cells fromperipheralblood blood
39 chr3:134245200-134246600 Strong transcription Primary B cells from cord blood blood
40 chr3:134245200-134246600 Strong transcription Fetal Thymus thymus
41 chr3:134245200-134251200 Weak transcription Primary T cells from cord blood blood
42 chr3:134245200-134251600 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr3:134245200-134251800 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr3:134245400-134245800 Weak transcription Ovary ovary
45 chr3:134245400-134246200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:134245400-134253000 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015