The 2.0 version of rSNPBase

Variant report

Variant rs9289475
Chromosome Location chr3:134236459-134236460
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:134206400-134241200 Weak transcription Rectal Smooth Muscle rectum
2 chr3:134206600-134251600 Weak transcription Colonic Mucosa Colon
3 chr3:134207000-134241600 Weak transcription Psoas Muscle Psoas
4 chr3:134213800-134246000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr3:134215800-134242200 Weak transcription NHEK skin
6 chr3:134222000-134245800 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:134223200-134237000 Weak transcription Brain Inferior Temporal Lobe brain
8 chr3:134223600-134240800 Weak transcription Colon Smooth Muscle Colon
9 chr3:134224400-134237600 Weak transcription Fetal Brain Female brain
10 chr3:134224600-134237600 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr3:134224800-134238800 Weak transcription Brain Cingulate Gyrus brain
12 chr3:134224800-134241200 Weak transcription Brain Germinal Matrix brain
13 chr3:134224800-134245800 Weak transcription Pancreas Pancrea
14 chr3:134225000-134237600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:134225000-134255800 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr3:134225200-134241200 Weak transcription Fetal Kidney kidney
17 chr3:134225200-134256200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr3:134226400-134241400 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr3:134226600-134238800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr3:134230200-134237400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr3:134230200-134241200 Weak transcription Duodenum Mucosa Duodenum
22 chr3:134230400-134240800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr3:134230600-134238400 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr3:134230600-134238800 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr3:134230800-134237400 Weak transcription Fetal Stomach stomach
26 chr3:134230800-134237800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr3:134230800-134238000 Weak transcription Fetal Intestine Small intestine
28 chr3:134230800-134238800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr3:134230800-134242000 Weak transcription Left Ventricle heart
30 chr3:134230800-134251800 Weak transcription Aorta Aorta
31 chr3:134230800-134256000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr3:134231000-134236600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr3:134231000-134238200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr3:134231000-134238800 Weak transcription Brain Hippocampus Middle brain
35 chr3:134231200-134237800 Weak transcription GM12878-XiMat blood
36 chr3:134231200-134238600 Weak transcription Fetal Lung lung
37 chr3:134231200-134240800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr3:134231200-134240800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr3:134231200-134241400 Weak transcription Ovary ovary
40 chr3:134231200-134242200 Weak transcription Thymus Thymus
41 chr3:134231200-134255800 Weak transcription Placenta Placenta
42 chr3:134231400-134240800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr3:134231600-134242200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr3:134232000-134236600 Weak transcription HMEC breast
45 chr3:134232400-134236800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr3:134232600-134237200 Weak transcription Fetal Muscle Leg muscle
47 chr3:134232600-134237800 Weak transcription Primary T cells fromperipheralblood blood
48 chr3:134232600-134246000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr3:134232800-134237200 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr3:134232800-134238000 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015