The 2.0 version of rSNPBase

Variant report

Variant rs9890198
Chromosome Location chr17:37457480-37457481
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37408000-37463000 Weak transcription Small Intestine intestine
2 chr17:37409800-37464000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr17:37417400-37458600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr17:37417600-37460800 Weak transcription Fetal Brain Male brain
5 chr17:37425000-37473000 Weak transcription Pancreas Pancrea
6 chr17:37426600-37460800 Weak transcription Colonic Mucosa Colon
7 chr17:37426800-37468600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr17:37430800-37462600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr17:37431200-37462600 Weak transcription Colon Smooth Muscle Colon
10 chr17:37431400-37473400 Weak transcription Esophagus oesophagus
11 chr17:37435600-37469400 Weak transcription Gastric stomach
12 chr17:37436000-37496200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
13 chr17:37436800-37497800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr17:37437800-37462400 Weak transcription Brain Anterior Caudate brain
15 chr17:37438400-37461800 Weak transcription A549 lung
16 chr17:37438800-37463000 Weak transcription NHDF-Ad bronchial
17 chr17:37439000-37462800 Weak transcription NH-A brain
18 chr17:37439200-37462600 Weak transcription Muscle Satellite Cultured Cells --
19 chr17:37439200-37462800 Weak transcription Fetal Heart heart
20 chr17:37444000-37478400 Weak transcription Psoas Muscle Psoas
21 chr17:37444600-37462600 Strong transcription Fetal Intestine Small intestine
22 chr17:37446000-37459400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr17:37446800-37459600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
24 chr17:37447400-37457800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr17:37448200-37457800 Strong transcription Primary monocytes fromperipheralblood blood
26 chr17:37448200-37458800 Weak transcription HUVEC blood vessel
27 chr17:37448400-37458000 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr17:37448400-37461800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr17:37449200-37461000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr17:37449800-37457600 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr17:37450800-37460200 Strong transcription Primary T regulatory cells fromperipheralblood blood
32 chr17:37451000-37458000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr17:37451000-37459400 Strong transcription Fetal Muscle Trunk muscle
34 chr17:37451200-37458000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr17:37451400-37457600 Strong transcription Fetal Lung lung
36 chr17:37451400-37460200 Strong transcription Primary T cells fromperipheralblood blood
37 chr17:37452000-37458600 Weak transcription Stomach Mucosa stomach
38 chr17:37452200-37457600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr17:37452600-37457600 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr17:37452600-37461200 Strong transcription Fetal Thymus thymus
41 chr17:37452800-37457800 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr17:37453200-37457600 Strong transcription Primary T helper naive cells from peripheral blood blood
43 chr17:37453200-37457600 Strong transcription Brain Inferior Temporal Lobe brain
44 chr17:37453400-37457600 Strong transcription Fetal Muscle Leg muscle
45 chr17:37453400-37461200 Strong transcription Primary T cells from cord blood blood
46 chr17:37453400-37463200 Weak transcription NHLF lung
47 chr17:37453400-37507800 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr17:37453600-37457600 Strong transcription Primary hematopoietic stem cells blood
49 chr17:37453600-37457800 Strong transcription Fetal Intestine Large intestine
50 chr17:37453600-37461200 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015