The 2.0 version of rSNPBase

Variant report

Variant rs8079560
Chromosome Location chr17:37497661-37497662
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37436800-37497800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
2 chr17:37453400-37507800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr17:37454000-37511600 Weak transcription Hela-S3 cervix
4 chr17:37455200-37499800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr17:37456200-37499400 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr17:37457600-37497800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr17:37460400-37498400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr17:37461200-37515400 Weak transcription Lung lung
9 chr17:37461400-37522000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr17:37463800-37528200 Weak transcription HSMMtube muscle
11 chr17:37472800-37499400 Weak transcription Fetal Muscle Leg muscle
12 chr17:37482400-37497800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr17:37483400-37499800 Weak transcription Gastric stomach
14 chr17:37484200-37500400 Weak transcription Pancreas Pancrea
15 chr17:37485200-37520800 Weak transcription Rectal Smooth Muscle rectum
16 chr17:37485600-37497800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr17:37487200-37499600 Weak transcription NHDF-Ad bronchial
18 chr17:37488800-37499800 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr17:37488800-37515400 Weak transcription Psoas Muscle Psoas
20 chr17:37488800-37516800 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr17:37489000-37522200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr17:37489400-37516800 Weak transcription Aorta Aorta
23 chr17:37491600-37500600 Weak transcription Fetal Kidney kidney
24 chr17:37491600-37520600 Weak transcription Colon Smooth Muscle Colon
25 chr17:37491800-37497800 Weak transcription Ovary ovary
26 chr17:37492200-37499800 Weak transcription NH-A brain
27 chr17:37492200-37514200 Weak transcription Brain Hippocampus Middle brain
28 chr17:37492400-37497800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr17:37492400-37508800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr17:37492400-37514600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr17:37492400-37516400 Weak transcription Brain Anterior Caudate brain
32 chr17:37492400-37522400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr17:37492600-37505000 Weak transcription HepG2 liver
34 chr17:37492800-37502800 Weak transcription Fetal Heart heart
35 chr17:37492800-37507000 Weak transcription A549 lung
36 chr17:37493200-37506400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr17:37493400-37497800 Weak transcription Stomach Smooth Muscle stomach
38 chr17:37493400-37515200 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr17:37493800-37507000 Weak transcription Small Intestine intestine
40 chr17:37494000-37497800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr17:37494200-37500000 Weak transcription Osteobl bone
42 chr17:37494200-37501000 Weak transcription Fetal Brain Male brain
43 chr17:37494200-37508800 Weak transcription Brain Cingulate Gyrus brain
44 chr17:37494400-37517400 Weak transcription Placenta Amnion Placenta Amnion
45 chr17:37495200-37498200 Weak transcription NHLF lung
46 chr17:37495200-37501600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr17:37495200-37502600 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr17:37495200-37504200 Weak transcription Dnd41 blood
49 chr17:37495600-37498000 Weak transcription Spleen Spleen
50 chr17:37495800-37497800 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015