The 2.0 version of rSNPBase

Variant report

Variant rs9905432
Chromosome Location chr17:37555918-37555919
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37498800-37556400 Weak transcription Thymus Thymus
2 chr17:37514800-37556200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr17:37517600-37556600 Weak transcription Fetal Muscle Leg muscle
4 chr17:37522600-37556200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr17:37522800-37556400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr17:37523400-37556200 Weak transcription Ovary ovary
7 chr17:37533200-37556200 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr17:37533200-37556600 Weak transcription Pancreas Pancrea
9 chr17:37534200-37556200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr17:37534400-37556200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr17:37536800-37556000 Weak transcription Brain Anterior Caudate brain
12 chr17:37537000-37556200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr17:37537000-37556200 Weak transcription Brain Hippocampus Middle brain
14 chr17:37539200-37556800 Weak transcription Gastric stomach
15 chr17:37541600-37556800 Weak transcription Lung lung
16 chr17:37541600-37557000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr17:37543400-37556600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr17:37543600-37556000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr17:37544400-37556200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr17:37544600-37556000 Weak transcription Fetal Stomach stomach
21 chr17:37544600-37556400 Weak transcription Primary B cells from peripheral blood blood
22 chr17:37544600-37556400 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr17:37544600-37556600 Weak transcription Fetal Thymus thymus
24 chr17:37544800-37556200 Weak transcription Primary monocytes fromperipheralblood blood
25 chr17:37544800-37556400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr17:37544800-37556600 Weak transcription Primary T cells fromperipheralblood blood
27 chr17:37544800-37556600 Weak transcription Fetal Muscle Trunk muscle
28 chr17:37545000-37556600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr17:37545200-37556600 Weak transcription Placenta Placenta
30 chr17:37548600-37556600 Weak transcription Left Ventricle heart
31 chr17:37550400-37556000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr17:37550400-37556400 Weak transcription HSMM muscle
33 chr17:37552400-37556400 Weak transcription Fetal Kidney kidney
34 chr17:37552800-37556400 Weak transcription Brain Substantia Nigra brain
35 chr17:37552800-37556600 Weak transcription NH-A brain
36 chr17:37553800-37556200 Weak transcription Fetal Intestine Small intestine
37 chr17:37554800-37556000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr17:37554800-37556400 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr17:37555000-37556200 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr17:37555200-37556400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr17:37555200-37556400 Enhancers Colon Smooth Muscle Colon
42 chr17:37555200-37556400 Enhancers Skeletal Muscle Male skeletal muscle
43 chr17:37555200-37556600 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr17:37555400-37556000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr17:37555400-37556600 Enhancers Adipose Nuclei Adipose
46 chr17:37555400-37556600 Enhancers Rectal Smooth Muscle rectum
47 chr17:37555600-37556000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr17:37555600-37556000 Enhancers Primary B cells from cord blood blood
49 chr17:37555600-37556000 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr17:37555600-37556000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015