Variant report
| Variant | rs12600625 |
|---|---|
| Chromosome Location | chr17:37552781-37552782 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr17:37498800-37556400 | Weak transcription | Thymus | Thymus |
| 2 | chr17:37514800-37556200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr17:37515400-37555600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr17:37517600-37555200 | Weak transcription | Brain Germinal Matrix | brain |
| 5 | chr17:37517600-37556600 | Weak transcription | Fetal Muscle Leg | muscle |
| 6 | chr17:37518000-37554800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 7 | chr17:37522600-37555400 | Weak transcription | Fetal Lung | lung |
| 8 | chr17:37522600-37556200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 9 | chr17:37522800-37554800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 10 | chr17:37522800-37555400 | Weak transcription | Adipose Nuclei | Adipose |
| 11 | chr17:37522800-37556400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 12 | chr17:37523400-37556200 | Weak transcription | Ovary | ovary |
| 13 | chr17:37523600-37555800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 14 | chr17:37530200-37555600 | Weak transcription | Primary T cells from cord blood | blood |
| 15 | chr17:37533200-37556200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 16 | chr17:37533200-37556600 | Weak transcription | Pancreas | Pancrea |
| 17 | chr17:37534200-37556200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 18 | chr17:37534400-37555600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 19 | chr17:37534400-37555800 | Weak transcription | Hela-S3 | cervix |
| 20 | chr17:37534400-37556200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 21 | chr17:37534600-37554800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 22 | chr17:37536000-37553600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 23 | chr17:37536800-37556000 | Weak transcription | Brain Anterior Caudate | brain |
| 24 | chr17:37537000-37555600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 25 | chr17:37537000-37556200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 26 | chr17:37537000-37556200 | Weak transcription | Brain Hippocampus Middle | brain |
| 27 | chr17:37538800-37555600 | Weak transcription | Primary B cells from cord blood | blood |
| 28 | chr17:37539200-37556800 | Weak transcription | Gastric | stomach |
| 29 | chr17:37541400-37555600 | Weak transcription | Brain Angular Gyrus | brain |
| 30 | chr17:37541600-37556800 | Weak transcription | Lung | lung |
| 31 | chr17:37541600-37557000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr17:37542800-37555800 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 33 | chr17:37543200-37555600 | Weak transcription | Fetal Brain Female | brain |
| 34 | chr17:37543400-37556600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 35 | chr17:37543600-37555400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr17:37543600-37556000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr17:37544400-37556200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 38 | chr17:37544600-37554600 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 39 | chr17:37544600-37556000 | Weak transcription | Fetal Stomach | stomach |
| 40 | chr17:37544600-37556400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 41 | chr17:37544600-37556400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 42 | chr17:37544600-37556600 | Weak transcription | Fetal Thymus | thymus |
| 43 | chr17:37544800-37553400 | Weak transcription | Fetal Intestine Large | intestine |
| 44 | chr17:37544800-37554600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 45 | chr17:37544800-37555600 | Weak transcription | Liver | Liver |
| 46 | chr17:37544800-37555800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 47 | chr17:37544800-37556200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 48 | chr17:37544800-37556400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 49 | chr17:37544800-37556600 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 50 | chr17:37544800-37556600 | Weak transcription | Fetal Muscle Trunk | muscle |
