Variant report

Variant	rs632202
Chromosome Location	chr17:37453294-37453295
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 226 )
Associated
traits (count: 10 )

rSNPs within LD-proxies of this variant (count:211)

rs_ID	r²[population]
rs10221223	0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10432030	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10432031	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10445306	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10491128	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10491129	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11078893	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11078894	0.88[CHB][hapmap];0.86[ASN][1000 genomes]
rs11078895	0.88[CHB][hapmap];0.88[ASN][1000 genomes]
rs11078896	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11078897	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11078898	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11078900	0.81[ASN][1000 genomes]
rs11078901	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11078902	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11078903	0.81[CEU][hapmap]
rs11650081	0.81[ASN][1000 genomes]
rs11655972	0.88[ASN][1000 genomes]
rs11657899	0.90[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.90[TSI][hapmap]
rs11867312	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11868133	0.80[ASN][1000 genomes]
rs11869109	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11869259	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11869323	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12150047	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs12150493	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12449852	0.82[CHB][hapmap];0.82[CHD][hapmap]
rs12452509	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12452880	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12600625	0.87[ASN][1000 genomes]
rs12600751	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12937703	0.83[ASN][1000 genomes]
rs12938099	0.81[CHB][hapmap]
rs12938268	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12939831	0.82[ASN][1000 genomes]
rs12947620	0.85[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.87[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[ASN][1000 genomes]
rs12950186	0.87[CHB][hapmap];0.84[ASN][1000 genomes]
rs13341996	0.88[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1966915	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1966916	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2024073	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2061338	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2061342	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2100651	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2168785	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2302073	0.88[CHB][hapmap];0.90[ASN][1000 genomes]
rs2338755	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2338756	0.86[ASN][1000 genomes]
rs2338795	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2338797	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2338798	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2338799	0.87[CHB][hapmap]
rs2338800	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.88[TSI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2338801	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28482878	0.81[ASN][1000 genomes]
rs2879258	0.88[CHB][hapmap];0.92[CHD][hapmap];0.88[ASN][1000 genomes]
rs2879259	0.86[ASN][1000 genomes]
rs33933929	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34363096	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs34432983	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34473775	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34597616	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35285898	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35546703	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35667594	0.81[EUR][1000 genomes]
rs36064019	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3744348	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3744349	0.82[CHB][hapmap];0.80[ASN][1000 genomes]
rs3964723	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4325601	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4390625	0.81[CEU][hapmap];0.92[CHD][hapmap];0.85[JPT][hapmap];0.84[TSI][hapmap]
rs4410117	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4511574	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4516267	0.88[CHB][hapmap];0.92[CHD][hapmap];0.90[ASN][1000 genomes]
rs4794807	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4794810	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4795355	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4795356	0.88[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4795357	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4795358	0.82[CHB][hapmap]
rs4795359	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4795364	0.85[ASN][1000 genomes]
rs4795369	0.94[CHB][hapmap];0.95[CHD][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap]
rs55689507	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57399933	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57933226	0.85[ASN][1000 genomes]
rs582088	0.90[ASN][1000 genomes]
rs582176	0.88[CHB][hapmap];0.83[JPT][hapmap];0.90[ASN][1000 genomes]
rs583980	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs584377	0.82[CHB][hapmap];0.87[ASN][1000 genomes]
rs585961	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs587343	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs587880	0.86[ASN][1000 genomes]
rs588193	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs590051	0.88[CHB][hapmap];0.92[CHD][hapmap];0.90[ASN][1000 genomes]
rs593480	0.92[CHB][hapmap];0.85[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs594794	0.90[ASN][1000 genomes]
rs597069	0.87[CHB][hapmap];0.92[CHD][hapmap];0.89[ASN][1000 genomes]
rs600010	0.94[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs602282	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs602688	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs612209	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs620686	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62074994	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs632606	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs634365	0.83[ASW][hapmap];0.95[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs638201	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs644173	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.92[JPT][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs649180	0.88[CHB][hapmap];0.88[ASN][1000 genomes]
rs650106	0.87[CHB][hapmap];1.00[JPT][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503500	0.88[CHB][hapmap];0.92[CHD][hapmap];0.85[ASN][1000 genomes]
rs6503501	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6503502	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503503	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6503504	0.81[CHB][hapmap]
rs6503506	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6503507	0.88[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6503513	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.87[ASN][1000 genomes]
rs6503515	0.81[ASN][1000 genomes]
rs651827	0.90[ASN][1000 genomes]
rs665413	0.87[ASN][1000 genomes]
rs667193	0.87[ASN][1000 genomes]
rs667239	0.81[CHB][hapmap];0.92[CHD][hapmap];0.90[ASN][1000 genomes]
rs676882	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs677888	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs679995	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs68178216	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs683948	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7208252	0.82[CHD][hapmap]
rs7208274	0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7208487	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs7208714	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7210488	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7212621	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs7215889	0.82[ASN][1000 genomes]
rs7218074	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7218484	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7218670	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7220650	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7221875	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7222252	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap]
rs7223331	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7223438	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73293051	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7359658	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7405667	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7501488	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7503081	0.85[ASN][1000 genomes]
rs752314	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs755500	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs801417	0.86[ASN][1000 genomes]
rs801418	0.88[CHB][hapmap];0.90[ASN][1000 genomes]
rs801419	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801420	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801426	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.86[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801427	0.81[CHB][hapmap];0.87[CHD][hapmap];0.87[ASN][1000 genomes]
rs801429	0.87[ASN][1000 genomes]
rs801430	0.81[ASN][1000 genomes]
rs8065879	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8066704	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8067302	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8067948	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8068427	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8069451	0.90[CEU][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.81[YRI][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8070695	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8071300	0.80[ASN][1000 genomes]
rs8072297	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8072351	0.86[ASN][1000 genomes]
rs8073907	0.88[CHB][hapmap];0.92[CHD][hapmap];0.87[ASN][1000 genomes]
rs8076462	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs8076494	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8076546	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8077104	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8079303	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8079355	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8079560	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8079590	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap];0.81[YRI][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8079662	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8081033	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8081220	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8081338	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs883544	0.86[GIH][hapmap]
rs9646419	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs9747342	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9890198	0.90[ASN][1000 genomes]
rs9891892	0.81[ASN][1000 genomes]
rs9892055	0.88[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9892675	0.88[ASN][1000 genomes]
rs9893735	0.88[CHB][hapmap];0.92[CHD][hapmap];0.90[ASN][1000 genomes]
rs9894500	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9894586	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9894864	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9896913	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9898170	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9898773	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9901219	0.87[ASN][1000 genomes]
rs9903363	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9904334	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.81[YRI][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9904919	0.95[CEU][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9905432	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9905617	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9906612	0.82[CHB][hapmap];0.87[CHD][hapmap]
rs9908131	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs9908760	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9909064	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9909304	0.81[ASN][1000 genomes]
rs9912310	0.81[ASN][1000 genomes]
rs9913320	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9916302	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9944411	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9944459	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057470	chr17:37135183-37549816	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
2	nsv543339	chr17:37135183-37549816	Strong transcription Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
3	nsv932024	chr17:37192290-37850932	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	92 gene(s)	inside rSNPs	diseases
4	nsv833441	chr17:37320807-37476796	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
5	nsv1061084	chr17:37333956-37501598	Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
6	nsv1060126	chr17:37333956-37659189	Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
7	nsv1057655	chr17:37333956-37732451	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
8	nsv1066033	chr17:37333956-37795617	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
9	nsv543340	chr17:37333956-37795617	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
10	nsv908204	chr17:37349655-37682657	Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
11	nsv1057057	chr17:37395082-37627025	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
12	nsv1055612	chr17:37409865-37563236	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
13	nsv510709	chr17:37438419-37508395	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
14	nsv1061951	chr17:37442228-37770903	Bivalent Enhancer Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
15	nsv543341	chr17:37442228-37770903	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases

mRNA abundance (count:10)

SNP	Gene	Cis/trans	Tissue	Source
rs632202	RDM1	cis	cerebellum	SCAN
rs632202	PGAP3	cis	Heart Left Ventricle	GTEx
rs632202	SLFN14	cis	parietal	SCAN
rs632202	C17orf50	cis	parietal	SCAN
rs632202	NEUROD2	cis	parietal	SCAN
rs632202	DHRS11	cis	cerebellum	SCAN
rs632202	CCL4	cis	cerebellum	SCAN
rs632202	PGAP3	cis	cerebellum	SCAN
rs632202	CRKRS	Cis_1M	lymphoblastoid	RTeQTL
rs632202	PIGW	cis	parietal	SCAN

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:37408000-37463000	Weak transcription	Small Intestine	intestine
2	chr17:37409800-37464000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
3	chr17:37417400-37458600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr17:37417600-37460800	Weak transcription	Fetal Brain Male	brain
5	chr17:37425000-37473000	Weak transcription	Pancreas	Pancrea
6	chr17:37426200-37453800	Weak transcription	Aorta	Aorta
7	chr17:37426600-37460800	Weak transcription	Colonic Mucosa	Colon
8	chr17:37426800-37468600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr17:37430800-37462600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr17:37431200-37462600	Weak transcription	Colon Smooth Muscle	Colon
11	chr17:37431400-37453600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr17:37431400-37453600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr17:37431400-37473400	Weak transcription	Esophagus	oesophagus
14	chr17:37431600-37453800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr17:37431600-37453800	Weak transcription	Right Ventricle	heart
16	chr17:37433800-37457000	Weak transcription	GM12878-XiMat	blood
17	chr17:37435200-37453400	Weak transcription	Brain Cingulate Gyrus	brain
18	chr17:37435600-37469400	Weak transcription	Gastric	stomach
19	chr17:37435800-37453800	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr17:37435800-37455600	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr17:37436000-37455200	Weak transcription	Fetal Kidney	kidney
22	chr17:37436000-37496200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr17:37436200-37453600	Weak transcription	Spleen	Spleen
24	chr17:37436800-37453800	Weak transcription	Ovary	ovary
25	chr17:37436800-37497800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
26	chr17:37437400-37453800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr17:37437800-37462400	Weak transcription	Brain Anterior Caudate	brain
28	chr17:37438000-37454000	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr17:37438400-37454600	Weak transcription	HepG2	liver
30	chr17:37438400-37461800	Weak transcription	A549	lung
31	chr17:37438600-37456600	Weak transcription	HSMM	muscle
32	chr17:37438800-37455000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr17:37438800-37463000	Weak transcription	NHDF-Ad	bronchial
34	chr17:37439000-37462800	Weak transcription	NH-A	brain
35	chr17:37439200-37454600	Weak transcription	HSMMtube	muscle
36	chr17:37439200-37457200	Weak transcription	K562	blood
37	chr17:37439200-37462600	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr17:37439200-37462800	Weak transcription	Fetal Heart	heart
39	chr17:37442600-37453400	Weak transcription	Cortex derived primary cultured neurospheres	brain
40	chr17:37442800-37453800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr17:37444000-37478400	Weak transcription	Psoas Muscle	Psoas
42	chr17:37444600-37462600	Strong transcription	Fetal Intestine Small	intestine
43	chr17:37446000-37459400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr17:37446800-37459600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
45	chr17:37447000-37454600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr17:37447200-37453600	Weak transcription	Primary hematopoietic stem cells	blood
47	chr17:37447400-37457800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr17:37448000-37456000	Strong transcription	Rectal Mucosa Donor 29	rectum
49	chr17:37448200-37457800	Strong transcription	Primary monocytes fromperipheralblood	blood
50	chr17:37448200-37458800	Weak transcription	HUVEC	blood vessel

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