Variant report

Variant rs12939831
Chromosome Location chr17:37570373-37570374
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37558400-37583800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr17:37559000-37571000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr17:37559000-37571200 Weak transcription Right Atrium heart
4 chr17:37559000-37606600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr17:37559200-37571200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr17:37560800-37605000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr17:37560800-37605400 Strong transcription Fetal Thymus thymus
8 chr17:37560800-37605600 Strong transcription HUES6 Cell Line embryonic stem cell
9 chr17:37561000-37578400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr17:37561000-37585200 Strong transcription Brain Germinal Matrix brain
11 chr17:37561000-37604800 Strong transcription Fetal Muscle Trunk muscle
12 chr17:37561000-37604800 Strong transcription Placenta Placenta
13 chr17:37561000-37605200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr17:37561000-37605400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr17:37561200-37576600 Strong transcription Duodenum Smooth Muscle Duodenum
16 chr17:37561200-37578400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr17:37561200-37578400 Strong transcription Fetal Muscle Leg muscle
18 chr17:37561200-37604400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr17:37561200-37604600 Strong transcription Liver Liver
20 chr17:37561200-37605000 Strong transcription HUES64 Cell Line embryonic stem cell
21 chr17:37561200-37605200 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr17:37561400-37588200 Strong transcription HepG2 liver
23 chr17:37561400-37595400 Strong transcription Thymus Thymus
24 chr17:37561400-37604800 Strong transcription Primary monocytes fromperipheralblood blood
25 chr17:37561400-37604800 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr17:37561400-37605000 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr17:37561600-37604600 Strong transcription Primary T cells fromperipheralblood blood
28 chr17:37561600-37605600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr17:37561800-37577000 Strong transcription Dnd41 blood
30 chr17:37561800-37587600 Strong transcription Primary T cells from cord blood blood
31 chr17:37561800-37604400 Strong transcription HUES48 Cell Line embryonic stem cell
32 chr17:37562000-37604400 Strong transcription Adipose Nuclei Adipose
33 chr17:37562000-37604600 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr17:37562000-37604600 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr17:37562200-37576200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr17:37562200-37604200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr17:37562200-37604400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr17:37562200-37604600 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr17:37562400-37576400 Strong transcription Primary B cells from peripheral blood blood
40 chr17:37562400-37604200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr17:37562400-37604600 Strong transcription iPS-20b Cell Line embryonic stem cell
42 chr17:37562400-37604600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr17:37562600-37584000 Strong transcription Osteobl bone
44 chr17:37562600-37604200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr17:37562800-37572000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr17:37562800-37600400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr17:37563000-37586200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr17:37563000-37604600 Strong transcription iPS-18 Cell Line embryonic stem cell
49 chr17:37563000-37604800 Strong transcription Primary T helper cells fromperipheralblood blood
50 chr17:37563600-37578000 Strong transcription Fetal Intestine Large intestine

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