Variant report

Variant	rs9908760
Chromosome Location	chr17:37499059-37499060
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr17:37493150..37495079-chr17:37497859..37499627,2	K562	blood:
2	chr17:37495025..37499725-chr17:37506231..37509469,4	K562	blood:
3	chr17:37496486..37499725-chr17:37507468..37510514,3	K562	blood:
4	chr17:37497908..37499524-chr17:37499722..37502631,3	K562	blood:

Extended variants
information (count: 243 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:228)

rs_ID	r²[population]
rs10221223	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10432030	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10432031	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10445306	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10491128	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10491129	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11078893	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11078894	0.81[ASN][1000 genomes]
rs11078895	0.83[ASN][1000 genomes]
rs11078896	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11078897	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11078898	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11078900	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11078901	0.82[EUR][1000 genomes]
rs11078902	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11078903	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11650081	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11650146	0.85[EUR][1000 genomes]
rs11651089	0.80[EUR][1000 genomes]
rs11655972	0.83[ASN][1000 genomes]
rs11657899	0.82[EUR][1000 genomes]
rs11867312	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11868029	0.82[EUR][1000 genomes]
rs11868133	0.85[ASN][1000 genomes]
rs11869109	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11869259	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11869323	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11870631	0.81[ASN][1000 genomes]
rs11871813	0.82[ASN][1000 genomes]
rs12150493	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12452509	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12452682	0.81[ASN][1000 genomes]
rs12452880	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12600625	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12600751	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12936646	0.81[ASN][1000 genomes]
rs12937703	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12938268	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12939831	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12943928	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12947620	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12948560	0.85[EUR][1000 genomes]
rs12948906	0.81[ASN][1000 genomes]
rs12950666	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13341996	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1966915	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1966916	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1971663	0.85[ASN][1000 genomes]
rs2024073	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2061338	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2061342	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2100651	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2168785	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2302073	0.85[ASN][1000 genomes]
rs2338755	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2338756	0.81[ASN][1000 genomes]
rs2338795	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2338797	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2338798	0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2338799	0.84[ASN][1000 genomes]
rs2338800	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2338801	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28482878	0.87[ASN][1000 genomes]
rs2879258	0.83[ASN][1000 genomes]
rs2879259	0.81[ASN][1000 genomes]
rs28799952	0.82[ASN][1000 genomes]
rs33933929	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34363096	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34432983	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34473775	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34597616	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34627893	0.84[EUR][1000 genomes]
rs35112839	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35285898	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35497503	0.84[ASN][1000 genomes]
rs35546703	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs35667594	0.88[EUR][1000 genomes]
rs36064019	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3744348	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3964723	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4286140	0.82[ASN][1000 genomes]
rs4287601	0.84[ASN][1000 genomes]
rs4325601	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4390625	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4410117	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4462633	0.81[ASN][1000 genomes]
rs4511574	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4516267	0.85[ASN][1000 genomes]
rs4794807	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4794808	0.82[ASN][1000 genomes]
rs4794810	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4795355	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4795356	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4795357	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4795359	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4795361	0.82[EUR][1000 genomes]
rs4795362	0.85[EUR][1000 genomes]
rs4795364	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4795369	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55689507	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55722796	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs57399933	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57448077	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs582088	0.85[ASN][1000 genomes]
rs582176	0.85[ASN][1000 genomes]
rs583980	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs584377	0.81[ASN][1000 genomes]
rs585961	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs587343	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs587880	0.80[ASN][1000 genomes]
rs588193	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs590051	0.85[ASN][1000 genomes]
rs593480	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs594794	0.85[ASN][1000 genomes]
rs597069	0.84[ASN][1000 genomes]
rs600010	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs602282	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs602688	0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61161659	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs612209	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs620686	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62074994	0.81[ASN][1000 genomes]
rs632202	0.90[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs632606	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs634365	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs638201	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs644173	0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs649180	0.83[ASN][1000 genomes]
rs650106	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503500	0.90[ASN][1000 genomes]
rs6503501	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6503502	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503503	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6503504	0.84[ASN][1000 genomes]
rs6503506	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503507	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503513	0.93[ASN][1000 genomes]
rs6503515	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs651827	0.85[ASN][1000 genomes]
rs665413	0.81[ASN][1000 genomes]
rs667193	0.81[ASN][1000 genomes]
rs667239	0.85[ASN][1000 genomes]
rs677888	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs679995	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs68178216	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs683948	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7208274	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7208487	0.83[ASN][1000 genomes]
rs7208714	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7210488	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7212621	0.82[ASN][1000 genomes]
rs7215889	0.80[EUR][1000 genomes]
rs7215983	0.82[ASN][1000 genomes]
rs7218074	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7218484	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7218670	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7219014	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7220650	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7221117	0.81[ASN][1000 genomes]
rs7221875	0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7223331	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7223438	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73293051	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7359658	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7405667	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7501488	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7503081	0.90[ASN][1000 genomes]
rs752314	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs755500	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs801417	0.80[ASN][1000 genomes]
rs801418	0.85[ASN][1000 genomes]
rs801419	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs801420	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs801426	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs801427	0.82[ASN][1000 genomes]
rs801429	0.82[ASN][1000 genomes]
rs8065879	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8066704	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8067302	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8067948	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8068427	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8069451	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs8070695	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8071300	0.86[ASN][1000 genomes]
rs8072297	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8072351	0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8073511	0.83[ASN][1000 genomes]
rs8073907	0.82[ASN][1000 genomes]
rs8076494	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8076546	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8077104	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8079303	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8079355	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8079560	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8079590	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8079662	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8081033	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8081220	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8081338	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9747342	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9890198	0.85[ASN][1000 genomes]
rs9891892	0.87[ASN][1000 genomes]
rs9892055	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9892675	0.94[ASN][1000 genomes]
rs9893735	0.85[ASN][1000 genomes]
rs9894500	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9894586	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9894864	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9896913	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9898170	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9898773	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9899069	0.83[ASN][1000 genomes]
rs9901219	0.93[ASN][1000 genomes]
rs9903363	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9904334	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9904919	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9905432	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9905617	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9906612	0.80[ASN][1000 genomes]
rs9908131	0.82[ASN][1000 genomes]
rs9909064	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9909304	0.87[ASN][1000 genomes]
rs9912212	0.83[ASN][1000 genomes]
rs9912310	0.87[ASN][1000 genomes]
rs9913320	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9916302	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9944411	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9944459	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057470	chr17:37135183-37549816	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
2	nsv543339	chr17:37135183-37549816	Strong transcription Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
3	nsv932024	chr17:37192290-37850932	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	92 gene(s)	inside rSNPs	diseases
4	nsv1061084	chr17:37333956-37501598	Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
5	nsv1060126	chr17:37333956-37659189	Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
6	nsv1057655	chr17:37333956-37732451	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
7	nsv1066033	chr17:37333956-37795617	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
8	nsv543340	chr17:37333956-37795617	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
9	nsv908204	chr17:37349655-37682657	Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
10	nsv1057057	chr17:37395082-37627025	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
11	nsv1055612	chr17:37409865-37563236	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
12	nsv510709	chr17:37438419-37508395	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
13	nsv1061951	chr17:37442228-37770903	Bivalent Enhancer Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
14	nsv543341	chr17:37442228-37770903	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
15	esv1825702	chr17:37487168-37876767	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs9908760	PGAP3	cis	Thyroid	GTEx
rs9908760	PGAP3	cis	Heart Left Ventricle	GTEx
rs9908760	CRKRS	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:37453400-37507800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr17:37454000-37511600	Weak transcription	Hela-S3	cervix
3	chr17:37455200-37499800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
4	chr17:37456200-37499400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr17:37461200-37515400	Weak transcription	Lung	lung
6	chr17:37461400-37522000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr17:37463800-37528200	Weak transcription	HSMMtube	muscle
8	chr17:37472800-37499400	Weak transcription	Fetal Muscle Leg	muscle
9	chr17:37483400-37499800	Weak transcription	Gastric	stomach
10	chr17:37484200-37500400	Weak transcription	Pancreas	Pancrea
11	chr17:37485200-37520800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr17:37487200-37499600	Weak transcription	NHDF-Ad	bronchial
13	chr17:37488800-37499800	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr17:37488800-37515400	Weak transcription	Psoas Muscle	Psoas
15	chr17:37488800-37516800	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr17:37489000-37522200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr17:37489400-37516800	Weak transcription	Aorta	Aorta
18	chr17:37491600-37500600	Weak transcription	Fetal Kidney	kidney
19	chr17:37491600-37520600	Weak transcription	Colon Smooth Muscle	Colon
20	chr17:37492200-37499800	Weak transcription	NH-A	brain
21	chr17:37492200-37514200	Weak transcription	Brain Hippocampus Middle	brain
22	chr17:37492400-37508800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr17:37492400-37514600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr17:37492400-37516400	Weak transcription	Brain Anterior Caudate	brain
25	chr17:37492400-37522400	Weak transcription	Sigmoid Colon	Sigmoid Colon
26	chr17:37492600-37505000	Weak transcription	HepG2	liver
27	chr17:37492800-37502800	Weak transcription	Fetal Heart	heart
28	chr17:37492800-37507000	Weak transcription	A549	lung
29	chr17:37493200-37506400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
30	chr17:37493400-37515200	Weak transcription	Primary neutrophils fromperipheralblood	blood
31	chr17:37493800-37507000	Weak transcription	Small Intestine	intestine
32	chr17:37494200-37500000	Weak transcription	Osteobl	bone
33	chr17:37494200-37501000	Weak transcription	Fetal Brain Male	brain
34	chr17:37494200-37508800	Weak transcription	Brain Cingulate Gyrus	brain
35	chr17:37494400-37517400	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr17:37495200-37501600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr17:37495200-37502600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
38	chr17:37495200-37504200	Weak transcription	Dnd41	blood
39	chr17:37495800-37499600	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chr17:37495800-37506000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr17:37495800-37508000	Weak transcription	Liver	Liver
42	chr17:37496000-37499400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr17:37496000-37500000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr17:37496000-37505600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr17:37496400-37508400	Weak transcription	Right Ventricle	heart
46	chr17:37496400-37534000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr17:37496600-37508400	Weak transcription	Left Ventricle	heart
48	chr17:37496600-37520800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
49	chr17:37496800-37522000	Weak transcription	Fetal Stomach	stomach
50	chr17:37497400-37499200	Strong transcription	Primary T helper cells fromperipheralblood	blood

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