Variant report

Variant	rs2338755
Chromosome Location	chr17:37419317-37419318
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 208 )
Associated
traits (count: 8 )

rSNPs within LD-proxies of this variant (count:196)

rs_ID	r²[population]
rs10221223	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10432030	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10432031	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10445306	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10491128	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10491129	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11078893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11078894	0.88[CHB][hapmap];0.88[ASN][1000 genomes]
rs11078895	0.88[CHB][hapmap];0.90[ASN][1000 genomes]
rs11078896	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11078897	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11078898	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11650146	0.80[EUR][1000 genomes]
rs11655972	0.90[ASN][1000 genomes]
rs11867312	0.83[EUR][1000 genomes]
rs11869109	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11869259	0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11869323	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12150047	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs12150493	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12452509	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12452880	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12600625	0.85[ASN][1000 genomes]
rs12600751	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12937703	0.81[ASN][1000 genomes]
rs12938099	0.81[CHB][hapmap]
rs12938268	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12939831	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12947620	0.83[ASW][hapmap];0.89[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];0.92[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.95[TSI][hapmap];0.81[EUR][1000 genomes]
rs12950186	0.87[CHB][hapmap];0.86[ASN][1000 genomes]
rs13341996	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1966915	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1966916	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2024073	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2061338	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2061342	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2100651	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2168785	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2302073	0.88[CHB][hapmap];0.88[ASN][1000 genomes]
rs2338756	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2338795	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2338797	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2338798	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2338799	0.87[CHB][hapmap]
rs2338800	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2338801	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2879258	0.88[CHB][hapmap];0.92[CHD][hapmap];0.90[ASN][1000 genomes]
rs2879259	0.88[ASN][1000 genomes]
rs33933929	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34363096	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34432983	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34473775	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34597616	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35285898	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35546703	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35667594	0.83[EUR][1000 genomes]
rs36064019	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3744348	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3744349	0.82[CHB][hapmap];0.82[ASN][1000 genomes]
rs3964723	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4325601	0.99[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4375688	0.81[ASN][1000 genomes]
rs4410117	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4511574	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];0.83[MKK][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4516267	0.88[CHB][hapmap];0.92[CHD][hapmap];0.88[ASN][1000 genomes]
rs4794807	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4794810	0.83[EUR][1000 genomes]
rs4795355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4795356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4795357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4795358	0.82[CHB][hapmap]
rs4795359	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4795364	0.83[ASN][1000 genomes]
rs4795369	0.94[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap]
rs55689507	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57399933	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57933226	0.87[ASN][1000 genomes]
rs582088	0.88[ASN][1000 genomes]
rs582176	0.88[CHB][hapmap];0.83[JPT][hapmap];0.88[ASN][1000 genomes]
rs583980	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs584377	0.82[CHB][hapmap];0.85[ASN][1000 genomes]
rs585961	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.97[TSI][hapmap];0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs587343	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs587880	0.87[ASN][1000 genomes]
rs588193	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs590051	0.88[CHB][hapmap];0.92[CHD][hapmap];0.88[ASN][1000 genomes]
rs593480	0.92[CHB][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs594794	0.88[ASN][1000 genomes]
rs597069	0.87[CHB][hapmap];0.92[CHD][hapmap];0.87[ASN][1000 genomes]
rs600010	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs602282	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs602688	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs612209	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs620686	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62074994	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs632202	0.83[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs632606	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs634365	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs638201	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs644173	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.81[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs649180	0.88[CHB][hapmap];0.86[ASN][1000 genomes]
rs650106	0.87[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6503500	0.88[CHB][hapmap];0.92[CHD][hapmap];0.83[ASN][1000 genomes]
rs6503501	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6503502	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6503503	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6503504	0.81[CHB][hapmap]
rs6503506	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6503507	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6503513	0.89[ASW][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.88[LWK][hapmap];0.85[MEX][hapmap];0.81[MKK][hapmap];0.86[ASN][1000 genomes]
rs651827	0.88[ASN][1000 genomes]
rs665413	0.85[ASN][1000 genomes]
rs667193	0.85[ASN][1000 genomes]
rs667239	0.81[CHB][hapmap];0.92[CHD][hapmap];0.88[ASN][1000 genomes]
rs676882	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs677888	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs679995	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs68178216	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs683948	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7208252	0.82[CHD][hapmap]
rs7208274	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7208487	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs7208714	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7210488	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7212621	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs7215889	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7218074	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7218484	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7218670	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7220650	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7221875	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7222252	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[YRI][hapmap]
rs7223331	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7223438	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73293051	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7359658	0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7405667	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7501488	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7503081	0.83[ASN][1000 genomes]
rs752314	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs755500	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs801417	0.84[ASN][1000 genomes]
rs801418	0.88[CHB][hapmap];0.88[ASN][1000 genomes]
rs801419	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs801420	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs801426	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs801427	0.81[CHB][hapmap];0.87[CHD][hapmap];0.86[ASN][1000 genomes]
rs801429	0.86[ASN][1000 genomes]
rs8065879	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8066704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8067302	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8067948	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8068427	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8069451	0.94[ASW][hapmap];0.95[CEU][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[TSI][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8070695	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[YRI][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8072297	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8072351	0.84[ASN][1000 genomes]
rs8073907	0.88[CHB][hapmap];0.92[CHD][hapmap];0.89[ASN][1000 genomes]
rs8076462	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap]
rs8076494	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8076546	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[YRI][hapmap];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8077104	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8079303	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8079355	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8079560	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8079590	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8079662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8081033	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8081220	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8081338	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9646419	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs9747342	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9890198	0.88[ASN][1000 genomes]
rs9892055	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9892675	0.87[ASN][1000 genomes]
rs9893735	0.88[CHB][hapmap];0.92[CHD][hapmap];0.88[ASN][1000 genomes]
rs9894500	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9894586	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9894864	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9896913	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9898170	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9898773	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9901219	0.86[ASN][1000 genomes]
rs9903363	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9904334	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9904919	1.00[CEU][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9905432	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9905617	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9906612	0.82[CHB][hapmap];0.87[CHD][hapmap]
rs9908131	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs9908760	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9909064	0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9913320	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9916302	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9944411	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9944459	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057470	chr17:37135183-37549816	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
2	nsv543339	chr17:37135183-37549816	Strong transcription Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
3	nsv932024	chr17:37192290-37850932	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	92 gene(s)	inside rSNPs	diseases
4	nsv833441	chr17:37320807-37476796	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
5	nsv1061084	chr17:37333956-37501598	Bivalent/Poised TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
6	nsv1060126	chr17:37333956-37659189	Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
7	nsv1057655	chr17:37333956-37732451	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
8	nsv1066033	chr17:37333956-37795617	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
9	nsv543340	chr17:37333956-37795617	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
10	nsv908204	chr17:37349655-37682657	Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
11	nsv1057057	chr17:37395082-37627025	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
12	nsv1055612	chr17:37409865-37563236	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:8)

SNP	Gene	Cis/trans	Tissue	Source
rs2338755	PIGW	cis	parietal	SCAN
rs2338755	SLFN14	cis	parietal	SCAN
rs2338755	PGAP3	cis	Heart Left Ventricle	GTEx
rs2338755	NEUROD2	cis	parietal	SCAN
rs2338755	DHRS11	cis	cerebellum	SCAN
rs2338755	CCL4	cis	cerebellum	SCAN
rs2338755	PGAP3	cis	cerebellum	SCAN
rs2338755	RAD51L3	cis	cerebellum	SCAN

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:37401000-37426000	Weak transcription	NHLF	lung
2	chr17:37401000-37433000	Weak transcription	Fetal Heart	heart
3	chr17:37401000-37437000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr17:37401400-37437400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr17:37405000-37437000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr17:37406800-37425400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr17:37407200-37439200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr17:37407600-37427400	Strong transcription	Placenta	Placenta
9	chr17:37407800-37431400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr17:37408000-37425400	Strong transcription	Fetal Lung	lung
11	chr17:37408000-37427200	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr17:37408000-37440200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr17:37408000-37441600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr17:37408000-37463000	Weak transcription	Small Intestine	intestine
15	chr17:37408200-37427200	Strong transcription	Primary T cells from cord blood	blood
16	chr17:37408200-37442400	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr17:37408400-37437400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr17:37409000-37419600	Strong transcription	Fetal Muscle Leg	muscle
19	chr17:37409000-37422000	Strong transcription	Primary T cells fromperipheralblood	blood
20	chr17:37409000-37426800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr17:37409000-37432800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
22	chr17:37409000-37438800	Strong transcription	Primary neutrophils fromperipheralblood	blood
23	chr17:37409200-37419400	Strong transcription	Fetal Muscle Trunk	muscle
24	chr17:37409200-37431600	Strong transcription	Fetal Thymus	thymus
25	chr17:37409400-37437400	Weak transcription	HUVEC	blood vessel
26	chr17:37409800-37437400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
27	chr17:37409800-37464000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr17:37410000-37437200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
29	chr17:37410400-37420600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr17:37411000-37421200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
31	chr17:37411600-37437400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr17:37412000-37421800	Strong transcription	Primary T helper cells PMA-I stimulated	--
33	chr17:37412000-37422200	Strong transcription	Primary T helper cells fromperipheralblood	blood
34	chr17:37412200-37427400	Strong transcription	Stomach Smooth Muscle	stomach
35	chr17:37412800-37422400	Strong transcription	Primary hematopoietic stem cells	blood
36	chr17:37412800-37427000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr17:37413200-37422600	Strong transcription	Duodenum Mucosa	Duodenum
38	chr17:37413400-37420800	Strong transcription	Brain Cingulate Gyrus	brain
39	chr17:37413600-37421000	Strong transcription	Fetal Brain Female	brain
40	chr17:37413600-37422400	Strong transcription	Primary B cells from peripheral blood	blood
41	chr17:37413600-37431600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr17:37413800-37420800	Strong transcription	Thymus	Thymus
43	chr17:37413800-37421000	Strong transcription	Dnd41	blood
44	chr17:37413800-37423000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
45	chr17:37413800-37423400	Strong transcription	Fetal Intestine Large	intestine
46	chr17:37413800-37426600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr17:37414000-37421400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr17:37414000-37425400	Strong transcription	Rectal Mucosa Donor 29	rectum
49	chr17:37414000-37427000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
50	chr17:37414200-37422400	Strong transcription	Rectal Mucosa Donor 31	rectum

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