Variant report

Variant	rs8076494
Chromosome Location	chr17:37516722-37516723
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr17:37497042..37498791-chr17:37515042..37516791,2	K562	blood:

Extended variants
information (count: 270 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:257)

rs_ID	r²[population]
rs10221223	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10432030	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10432031	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10445306	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10445307	0.82[ASN][1000 genomes]
rs10491128	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10491129	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11078893	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs11078894	0.88[CHB][hapmap]
rs11078895	0.88[CHB][hapmap]
rs11078896	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11078897	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11078898	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11078900	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11078901	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11078902	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11078903	0.85[CEU][hapmap];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11078904	0.81[ASN][1000 genomes]
rs11078906	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap]
rs11078907	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11650081	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11650146	0.85[EUR][1000 genomes]
rs11651089	0.80[EUR][1000 genomes]
rs11654018	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs11657058	0.82[CHB][hapmap]
rs11657899	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11658678	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11867312	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11868029	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11868030	0.82[ASN][1000 genomes]
rs11868133	0.88[ASN][1000 genomes]
rs11869109	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11869259	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11869323	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11870631	0.83[ASN][1000 genomes]
rs11871813	0.86[ASN][1000 genomes]
rs12150047	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs12150493	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12449852	0.82[CHB][hapmap];0.82[CHD][hapmap]
rs12450559	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs12452509	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12452682	0.83[ASN][1000 genomes]
rs12452880	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12600625	0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12600751	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12936646	0.83[ASN][1000 genomes]
rs12936996	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs12937703	0.84[AFR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12938099	0.81[CHB][hapmap]
rs12938268	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12939831	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12942352	0.81[ASN][1000 genomes]
rs12942360	0.81[ASN][1000 genomes]
rs12943928	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12947506	0.82[CHB][hapmap];0.85[CHD][hapmap]
rs12947620	0.89[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12948560	0.85[EUR][1000 genomes]
rs12948906	0.83[ASN][1000 genomes]
rs12950186	0.87[CHB][hapmap]
rs12950666	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13341996	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1966915	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1966916	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1971663	0.80[ASN][1000 genomes]
rs2024073	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2061338	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2061342	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2100651	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2168785	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2302073	0.88[CHB][hapmap];0.80[ASN][1000 genomes]
rs2303316	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs2338755	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2338795	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2338797	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2338798	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2338799	0.87[CHB][hapmap];0.85[ASN][1000 genomes]
rs2338800	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.97[TSI][hapmap];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2338801	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28482878	0.82[ASN][1000 genomes]
rs2879258	0.88[CHB][hapmap];0.92[CHD][hapmap]
rs28799952	0.86[ASN][1000 genomes]
rs33933929	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs34363096	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs34432983	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34473775	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34597616	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34627893	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35112839	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35285898	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35497503	0.86[ASN][1000 genomes]
rs35546703	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs35667594	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs36064019	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3744348	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3744349	0.82[CHB][hapmap]
rs3964723	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4239222	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap]
rs4286140	0.85[ASN][1000 genomes]
rs4287601	0.85[ASN][1000 genomes]
rs4325601	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4390625	0.85[CEU][hapmap];0.92[CHD][hapmap];0.82[GIH][hapmap];0.85[JPT][hapmap];0.95[TSI][hapmap];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4410117	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4462633	0.83[ASN][1000 genomes]
rs4511574	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4516267	0.88[CHB][hapmap];0.92[CHD][hapmap];0.80[ASN][1000 genomes]
rs4794807	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4794808	0.86[ASN][1000 genomes]
rs4794810	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4794814	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs4795355	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4795356	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4795357	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4795358	0.82[CHB][hapmap];0.80[ASN][1000 genomes]
rs4795359	0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4795361	0.82[EUR][1000 genomes]
rs4795362	0.85[EUR][1000 genomes]
rs4795364	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4795369	0.89[ASW][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4795371	0.81[ASN][1000 genomes]
rs4795379	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs55689507	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55722796	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs57399933	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57448077	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs582088	0.80[ASN][1000 genomes]
rs582176	0.88[CHB][hapmap];0.83[JPT][hapmap];0.80[ASN][1000 genomes]
rs583980	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs584377	0.82[CHB][hapmap]
rs585961	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs587343	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs588193	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs590051	0.88[CHB][hapmap];0.92[CHD][hapmap];0.80[ASN][1000 genomes]
rs593480	0.92[CHB][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs594794	0.80[ASN][1000 genomes]
rs597069	0.87[CHB][hapmap];0.92[CHD][hapmap]
rs600010	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs602282	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs602688	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61161659	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs612209	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs620686	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs632202	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs632606	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs634365	1.00[CEU][hapmap];0.94[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs638201	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs644173	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs649180	0.88[CHB][hapmap]
rs650106	0.87[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6503500	0.88[CHB][hapmap];0.92[CHD][hapmap];0.85[ASN][1000 genomes]
rs6503501	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6503502	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6503503	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6503504	0.81[CHB][hapmap];0.85[ASN][1000 genomes]
rs6503506	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503507	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6503513	1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.95[ASN][1000 genomes]
rs6503515	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6503517	0.81[ASN][1000 genomes]
rs651827	0.80[ASN][1000 genomes]
rs667239	0.81[CHB][hapmap];0.92[CHD][hapmap];0.80[ASN][1000 genomes]
rs676882	0.82[CHB][hapmap];0.90[CHD][hapmap]
rs677888	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs679995	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs68178216	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs683948	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7208252	0.82[CHD][hapmap];0.80[ASN][1000 genomes]
rs7208274	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7208487	0.82[CHB][hapmap];0.90[CHD][hapmap];0.86[ASN][1000 genomes]
rs7208714	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7210488	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7212621	0.82[CHB][hapmap];0.90[CHD][hapmap];0.86[ASN][1000 genomes]
rs7215889	0.80[EUR][1000 genomes]
rs7215983	0.86[ASN][1000 genomes]
rs7216086	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs7218074	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7218484	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7218670	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7219014	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7219294	0.81[ASN][1000 genomes]
rs7220650	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7221117	0.86[ASN][1000 genomes]
rs7221875	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7222252	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs7223331	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7223438	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7225096	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs73293051	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7359658	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7405667	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7501488	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7503069	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7503081	0.85[ASN][1000 genomes]
rs7503377	0.82[CHB][hapmap];0.85[CHD][hapmap]
rs7503705	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs752314	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs755500	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.86[MKK][hapmap];0.97[TSI][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs801418	0.88[CHB][hapmap];0.80[ASN][1000 genomes]
rs801419	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801420	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801426	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs801427	0.81[CHB][hapmap];0.87[CHD][hapmap]
rs8065879	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8065963	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap]
rs8066704	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8067302	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8067948	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8068427	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8069074	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs8069451	0.95[CEU][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8070695	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8071300	0.83[ASN][1000 genomes]
rs8072297	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8072351	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8073511	0.86[ASN][1000 genomes]
rs8073907	0.88[CHB][hapmap];0.92[CHD][hapmap]
rs8076462	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8076546	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8077104	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8079303	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8079355	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs8079560	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8079590	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8079662	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8081033	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8081220	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8081338	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8081780	0.82[ASN][1000 genomes]
rs9646419	0.82[CHB][hapmap];0.88[CHD][hapmap]
rs9747342	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9890198	0.80[ASN][1000 genomes]
rs9891892	0.82[ASN][1000 genomes]
rs9892055	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9892675	0.86[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs9893735	0.88[CHB][hapmap];0.92[CHD][hapmap];0.80[ASN][1000 genomes]
rs9894500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9894586	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9894864	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9896913	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9898170	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9898773	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9899069	0.86[ASN][1000 genomes]
rs9901219	0.95[ASN][1000 genomes]
rs9903363	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9904334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9904919	1.00[CEU][hapmap];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9905432	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9905617	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9906612	0.82[CHB][hapmap];0.87[CHD][hapmap];0.83[ASN][1000 genomes]
rs9908131	0.82[CHB][hapmap];0.90[CHD][hapmap];0.86[ASN][1000 genomes]
rs9908760	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9909064	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9909304	0.82[ASN][1000 genomes]
rs9912310	0.82[ASN][1000 genomes]
rs9913320	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9916302	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9944411	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9944459	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:13 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057470	chr17:37135183-37549816	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
2	nsv543339	chr17:37135183-37549816	Strong transcription Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
3	nsv932024	chr17:37192290-37850932	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	92 gene(s)	inside rSNPs	diseases
4	nsv1060126	chr17:37333956-37659189	Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
5	nsv1057655	chr17:37333956-37732451	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
6	nsv1066033	chr17:37333956-37795617	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
7	nsv543340	chr17:37333956-37795617	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	78 gene(s)	inside rSNPs	diseases
8	nsv908204	chr17:37349655-37682657	Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
9	nsv1057057	chr17:37395082-37627025	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
10	nsv1055612	chr17:37409865-37563236	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
11	nsv1061951	chr17:37442228-37770903	Bivalent Enhancer Strong transcription Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
12	nsv543341	chr17:37442228-37770903	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
13	esv1825702	chr17:37487168-37876767	Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs8076494	C17orf37	cis	uninvolved skin	skin_eQTL
rs8076494	PGAP3	cis	Heart Left Ventricle	GTEx
rs8076494	PGAP3	cis	Liver	GTEx
rs8076494	DHRS11	cis	cerebellum	SCAN
rs8076494	PGAP3	cis	Thyroid	GTEx
rs8076494	NEUROD2	cis	parietal	SCAN
rs8076494	SLFN14	cis	parietal	SCAN
rs8076494	CCL4	cis	cerebellum	SCAN
rs8076494	PERLD1	cis	multi-tissue	Pritchard
rs8076494	RAD51L3	cis	cerebellum	SCAN
rs8076494	PGAP3	cis	cerebellum	SCAN
rs8076494	PIGW	cis	parietal	SCAN

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:37461400-37522000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr17:37463800-37528200	Weak transcription	HSMMtube	muscle
3	chr17:37485200-37520800	Weak transcription	Rectal Smooth Muscle	rectum
4	chr17:37488800-37516800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr17:37489000-37522200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr17:37489400-37516800	Weak transcription	Aorta	Aorta
7	chr17:37491600-37520600	Weak transcription	Colon Smooth Muscle	Colon
8	chr17:37492400-37522400	Weak transcription	Sigmoid Colon	Sigmoid Colon
9	chr17:37494400-37517400	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr17:37496400-37534000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr17:37496600-37520800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr17:37496800-37522000	Weak transcription	Fetal Stomach	stomach
13	chr17:37498200-37519000	Weak transcription	Placenta	Placenta
14	chr17:37498200-37520200	Weak transcription	Primary B cells from cord blood	blood
15	chr17:37498200-37534200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr17:37498400-37516800	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr17:37498400-37516800	Weak transcription	Fetal Lung	lung
18	chr17:37498400-37517000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr17:37498400-37522800	Weak transcription	Primary hematopoietic stem cells	blood
20	chr17:37498600-37520400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr17:37498600-37521000	Weak transcription	Stomach Smooth Muscle	stomach
22	chr17:37498600-37525200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
23	chr17:37498600-37529600	Weak transcription	Primary T cells from cord blood	blood
24	chr17:37498600-37532600	Weak transcription	Primary B cells from peripheral blood	blood
25	chr17:37498600-37541200	Weak transcription	Fetal Thymus	thymus
26	chr17:37498600-37543800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr17:37498600-37544000	Weak transcription	Fetal Muscle Trunk	muscle
28	chr17:37498800-37556400	Weak transcription	Thymus	Thymus
29	chr17:37499200-37544000	Weak transcription	Primary T helper cells fromperipheralblood	blood
30	chr17:37509000-37516800	Weak transcription	Right Ventricle	heart
31	chr17:37509000-37543000	Weak transcription	Primary T cells fromperipheralblood	blood
32	chr17:37509600-37522000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr17:37509600-37522000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr17:37511000-37520600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr17:37512200-37522600	Weak transcription	Gastric	stomach
36	chr17:37513800-37517800	Enhancers	K562	blood
37	chr17:37514000-37516800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr17:37514200-37519600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr17:37514800-37516800	Weak transcription	Colonic Mucosa	Colon
40	chr17:37514800-37556200	Weak transcription	Rectal Mucosa Donor 31	rectum
41	chr17:37515000-37525800	Weak transcription	Fetal Intestine Small	intestine
42	chr17:37515200-37518400	Enhancers	Monocytes-CD14+_RO01746	blood
43	chr17:37515200-37520000	Enhancers	Primary monocytes fromperipheralblood	blood
44	chr17:37515400-37517400	Enhancers	Adipose Nuclei	Adipose
45	chr17:37515400-37517600	Enhancers	Liver	Liver
46	chr17:37515400-37520800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr17:37515400-37555600	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr17:37515600-37543200	Weak transcription	Fetal Intestine Large	intestine
49	chr17:37515800-37517600	Enhancers	Brain Angular Gyrus	brain
50	chr17:37515800-37517800	Enhancers	Brain Hippocampus Middle	brain

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