The 2.0 version of rSNPBase

Variant report

Variant rs34597616
Chromosome Location chr17:37552989-37552990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:37498800-37556400 Weak transcription Thymus Thymus
2 chr17:37514800-37556200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr17:37515400-37555600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr17:37517600-37555200 Weak transcription Brain Germinal Matrix brain
5 chr17:37517600-37556600 Weak transcription Fetal Muscle Leg muscle
6 chr17:37518000-37554800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr17:37522600-37555400 Weak transcription Fetal Lung lung
8 chr17:37522600-37556200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr17:37522800-37554800 Weak transcription Rectal Smooth Muscle rectum
10 chr17:37522800-37555400 Weak transcription Adipose Nuclei Adipose
11 chr17:37522800-37556400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr17:37523400-37556200 Weak transcription Ovary ovary
13 chr17:37523600-37555800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr17:37530200-37555600 Weak transcription Primary T cells from cord blood blood
15 chr17:37533200-37556200 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr17:37533200-37556600 Weak transcription Pancreas Pancrea
17 chr17:37534200-37556200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr17:37534400-37555600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr17:37534400-37555800 Weak transcription Hela-S3 cervix
20 chr17:37534400-37556200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr17:37534600-37554800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr17:37536000-37553600 Weak transcription Duodenum Mucosa Duodenum
23 chr17:37536800-37556000 Weak transcription Brain Anterior Caudate brain
24 chr17:37537000-37555600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr17:37537000-37556200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr17:37537000-37556200 Weak transcription Brain Hippocampus Middle brain
27 chr17:37538800-37555600 Weak transcription Primary B cells from cord blood blood
28 chr17:37539200-37556800 Weak transcription Gastric stomach
29 chr17:37541400-37555600 Weak transcription Brain Angular Gyrus brain
30 chr17:37541600-37556800 Weak transcription Lung lung
31 chr17:37541600-37557000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr17:37542800-37555800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr17:37543200-37555600 Weak transcription Fetal Brain Female brain
34 chr17:37543400-37556600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr17:37543600-37555400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr17:37543600-37556000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr17:37544400-37556200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr17:37544600-37554600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr17:37544600-37556000 Weak transcription Fetal Stomach stomach
40 chr17:37544600-37556400 Weak transcription Primary B cells from peripheral blood blood
41 chr17:37544600-37556400 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr17:37544600-37556600 Weak transcription Fetal Thymus thymus
43 chr17:37544800-37553400 Weak transcription Fetal Intestine Large intestine
44 chr17:37544800-37554600 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr17:37544800-37555600 Weak transcription Liver Liver
46 chr17:37544800-37555800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr17:37544800-37556200 Weak transcription Primary monocytes fromperipheralblood blood
48 chr17:37544800-37556400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr17:37544800-37556600 Weak transcription Primary T cells fromperipheralblood blood
50 chr17:37544800-37556600 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015