Variant report

Variant	rs994997
Chromosome Location	chr7:117052950-117052951
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:117046890..117048959-chr7:117051865..117054037,2	K562	blood:
2	7:117050387-117057168..7:117100350-117112126	H1-hESC	embryonic stem cell:	embryo
3	chr7:117051958..117054415-chr7:117066094..117067747,2	K562	blood:

Variant related genes	Relation type
ENSG00000154438	Chromatin interaction
ENSG00000001626	Chromatin interaction

Extended variants
information (count: 70 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:70)

rs_ID	r²[population]
rs10249651	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10255917	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10264075	0.95[AFR][1000 genomes];0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10278130	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1029396	0.89[ASN][1000 genomes]
rs10953841	0.80[ASN][1000 genomes]
rs10953843	0.96[ASN][1000 genomes]
rs10953844	0.96[ASN][1000 genomes]
rs10953845	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10953846	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11769166	0.94[ASN][1000 genomes]
rs12333572	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12537601	0.90[ASN][1000 genomes]
rs13222797	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13245795	0.88[ASN][1000 genomes]
rs177068	0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs177070	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2051718	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2078967	0.88[ASN][1000 genomes]
rs213935	0.85[AMR][1000 genomes]
rs213936	0.85[AMR][1000 genomes]
rs213937	0.85[AMR][1000 genomes]
rs213942	0.85[AMR][1000 genomes]
rs213943	0.85[AMR][1000 genomes]
rs2188555	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2237722	0.87[AMR][1000 genomes]
rs2283054	0.81[ASN][1000 genomes]
rs254536	0.83[EUR][1000 genomes]
rs2896224	0.88[ASN][1000 genomes]
rs34256873	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3926643	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs39315	0.82[EUR][1000 genomes]
rs39317	0.83[EUR][1000 genomes]
rs39324	0.84[EUR][1000 genomes]
rs43025	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43026	0.87[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs43027	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43028	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43029	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43030	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43031	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs43032	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43033	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs43034	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs43035	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs43036	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4458806	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4727849	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4727850	0.96[ASN][1000 genomes]
rs4730786	0.85[ASN][1000 genomes]
rs6960356	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6966836	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6966838	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6972168	0.89[ASN][1000 genomes]
rs6979185	0.96[ASN][1000 genomes]
rs713134	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs725188	0.85[AMR][1000 genomes]
rs72603594	0.89[ASN][1000 genomes]
rs72603595	0.90[ASN][1000 genomes]
rs7357267	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs756665	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7784156	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7805063	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7808424	0.93[ASN][1000 genomes]
rs7810506	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs885993	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9792104	0.87[ASN][1000 genomes]
rs980574	0.85[AMR][1000 genomes]
rs989727	0.91[ASN][1000 genomes]
rs994996	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:117051000-117054200	Enhancers	Hela-S3	cervix
2	chr7:117052800-117053600	Enhancers	Fetal Lung	lung

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