Variant report

Variant	rs10251826
Chromosome Location	chr7:122147368-122147369
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:122146177..122148915-chr7:122151778..122154596,2	K562	blood:

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:68)

rs_ID	r²[population]
rs10231284	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10248008	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10256973	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10258850	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10266303	1.00[JPT][hapmap]
rs10266852	0.81[ASN][1000 genomes]
rs10268918	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10270700	0.81[ASN][1000 genomes]
rs10270868	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10272104	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10275217	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10277048	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10277588	0.81[ASN][1000 genomes]
rs10277691	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs10953961	1.00[JPT][hapmap]
rs11760643	1.00[JPT][hapmap]
rs11767048	1.00[JPT][hapmap]
rs11973627	1.00[CEU][hapmap]
rs12706423	1.00[JPT][hapmap]
rs28380284	0.81[ASN][1000 genomes]
rs28538086	0.81[ASN][1000 genomes]
rs28555167	0.81[ASN][1000 genomes]
rs28648607	0.81[ASN][1000 genomes]
rs28648932	0.81[ASN][1000 genomes]
rs28684792	0.81[ASN][1000 genomes]
rs28712478	0.81[ASN][1000 genomes]
rs28735372	0.81[ASN][1000 genomes]
rs4521704	1.00[JPT][hapmap]
rs4604372	1.00[JPT][hapmap]
rs57057655	0.81[ASN][1000 genomes]
rs57454175	0.81[ASN][1000 genomes]
rs57818732	0.81[ASN][1000 genomes]
rs58891896	0.81[ASN][1000 genomes]
rs60821982	0.81[ASN][1000 genomes]
rs61588302	0.81[ASN][1000 genomes]
rs6947220	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6947805	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6948337	0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6949798	0.81[ASN][1000 genomes]
rs6949994	0.81[ASN][1000 genomes]
rs6951877	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6956554	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6959220	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6963383	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs6964649	1.00[JPT][hapmap]
rs6970658	0.91[ASN][1000 genomes]
rs6979694	0.81[ASN][1000 genomes]
rs73431526	0.81[ASN][1000 genomes]
rs73431531	0.81[ASN][1000 genomes]
rs73431532	0.81[ASN][1000 genomes]
rs73431535	0.81[ASN][1000 genomes]
rs73431538	0.81[ASN][1000 genomes]
rs73431539	0.81[ASN][1000 genomes]
rs73431544	0.81[ASN][1000 genomes]
rs73431546	0.81[ASN][1000 genomes]
rs73431553	0.81[ASN][1000 genomes]
rs73431563	0.81[ASN][1000 genomes]
rs73431568	0.81[ASN][1000 genomes]
rs73431574	0.81[ASN][1000 genomes]
rs73431579	0.81[ASN][1000 genomes]
rs73431588	0.91[ASN][1000 genomes]
rs73431590	0.91[ASN][1000 genomes]
rs73431597	0.91[ASN][1000 genomes]
rs73431600	1.00[ASN][1000 genomes]
rs73431602	1.00[ASN][1000 genomes]
rs73433705	1.00[ASN][1000 genomes]
rs73433724	1.00[ASN][1000 genomes]
rs9918663	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017029	chr7:121958574-122338623	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:122047000-122155400	Weak transcription	Left Ventricle	heart
2	chr7:122138200-122155400	Weak transcription	Gastric	stomach
3	chr7:122140200-122159000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:122146200-122155400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr7:122146200-122155600	Weak transcription	Pancreas	Pancrea

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