Variant report

Variant rs10413052
Chromosome Location chr19:20968206-20968207
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20959600-20978200 Weak transcription Spleen Spleen
2 chr19:20959800-20970400 Weak transcription Gastric stomach
3 chr19:20959800-20978400 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr19:20960000-20975600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:20960000-20976200 Weak transcription H9 Cell Line embryonic stem cell
6 chr19:20960000-20976600 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr19:20960000-20977600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr19:20960000-20977600 Weak transcription Brain Hippocampus Middle brain
9 chr19:20960000-20978000 Weak transcription Brain Inferior Temporal Lobe brain
10 chr19:20960000-20978200 Weak transcription Pancreas Pancrea
11 chr19:20960000-20978400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr19:20960000-20978400 Weak transcription Brain Cingulate Gyrus brain
13 chr19:20960000-20978400 Weak transcription HSMM muscle
14 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
16 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
17 chr19:20960200-20979600 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr19:20960200-20979600 Weak transcription NH-A brain
19 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
20 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr19:20960800-20976600 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr19:20961000-20973600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
23 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr19:20962400-20978400 Weak transcription Osteobl bone
25 chr19:20963000-20969600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
26 chr19:20964000-20969000 Weak transcription Fetal Brain Male brain
27 chr19:20964000-20970200 Weak transcription Ovary ovary
28 chr19:20964000-20975600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr19:20965000-20975400 ZNF genes & repeats Dnd41 blood
30 chr19:20966000-20970600 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
31 chr19:20966400-20968400 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr19:20966400-20968600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr19:20966400-20968800 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr19:20966400-20969400 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr19:20966400-20969400 ZNF genes & repeats Primary B cells from cord blood blood
36 chr19:20966400-20969400 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
37 chr19:20966400-20969600 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr19:20966400-20969600 ZNF genes & repeats Fetal Brain Female brain
39 chr19:20966400-20970600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
40 chr19:20966400-20970800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
41 chr19:20966400-20971000 ZNF genes & repeats Brain Germinal Matrix brain
42 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr19:20966600-20968400 Strong transcription Duodenum Smooth Muscle Duodenum
44 chr19:20966600-20968600 Strong transcription Fetal Lung lung
45 chr19:20966600-20968800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr19:20966600-20968800 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
47 chr19:20966600-20969200 Strong transcription Primary B cells from peripheral blood blood
48 chr19:20966600-20969400 ZNF genes & repeats GM12878-XiMat blood
49 chr19:20966600-20969800 Strong transcription H1 Cell Line embryonic stem cell
50 chr19:20966600-20969800 ZNF genes & repeats Primary T cells from cord blood blood

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