Variant report

Variant rs446784
Chromosome Location chr19:20984840-20984841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
2 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
3 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
4 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
9 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
10 chr19:20975600-20985400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:20975600-20989200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
12 chr19:20976400-20985000 ZNF genes & repeats Fetal Lung lung
13 chr19:20976600-20990800 ZNF genes & repeats Dnd41 blood
14 chr19:20976800-20990800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
15 chr19:20977000-20991200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
16 chr19:20977600-20991000 ZNF genes & repeats Primary T cells from cord blood blood
17 chr19:20977800-20990200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
18 chr19:20978400-20985000 ZNF genes & repeats Adipose Nuclei Adipose
19 chr19:20978400-20991200 ZNF genes & repeats H1 Cell Line embryonic stem cell
20 chr19:20978800-20987600 Weak transcription Brain Inferior Temporal Lobe brain
21 chr19:20979000-20985600 Weak transcription Stomach Smooth Muscle stomach
22 chr19:20979000-20987200 Weak transcription Brain Cingulate Gyrus brain
23 chr19:20979800-20987600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr19:20981200-20991400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr19:20982000-20987000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr19:20982200-20985800 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
27 chr19:20982800-20985000 ZNF genes & repeats Primary B cells from peripheral blood blood
28 chr19:20982800-20985400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
29 chr19:20982800-20990800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
30 chr19:20982800-20991200 ZNF genes & repeats Duodenum Mucosa Duodenum
31 chr19:20983000-20985000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
32 chr19:20983000-20987600 Weak transcription Brain Anterior Caudate brain
33 chr19:20983200-20986200 Weak transcription Fetal Muscle Leg muscle
34 chr19:20983400-20986000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr19:20983400-20986200 Weak transcription Rectal Smooth Muscle rectum
36 chr19:20983400-20987000 Weak transcription Right Ventricle heart
37 chr19:20983400-20987200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr19:20983400-20988000 Weak transcription Brain Hippocampus Middle brain
39 chr19:20983600-20986400 Weak transcription HSMM muscle
40 chr19:20983600-20987200 Weak transcription Osteobl bone
41 chr19:20983600-20988000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr19:20984200-20985000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
43 chr19:20984400-20985200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr19:20984400-20985200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
45 chr19:20984400-20985200 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
46 chr19:20984400-20985400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
47 chr19:20984400-20985600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
48 chr19:20984400-20985800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
49 chr19:20984400-20986600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr19:20984400-20988800 ZNF genes & repeats Primary neutrophils fromperipheralblood blood

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