Variant report

Variant rs11669935
Chromosome Location chr19:20964503-20964504
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20959600-20978200 Weak transcription Spleen Spleen
2 chr19:20959800-20967200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr19:20959800-20967600 Weak transcription Left Ventricle heart
4 chr19:20959800-20967800 Weak transcription Aorta Aorta
5 chr19:20959800-20970400 Weak transcription Gastric stomach
6 chr19:20959800-20978400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr19:20960000-20964600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr19:20960000-20966600 Weak transcription Fetal Lung lung
9 chr19:20960000-20966800 Weak transcription Fetal Muscle Trunk muscle
10 chr19:20960000-20966800 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr19:20960000-20967200 Weak transcription Rectal Smooth Muscle rectum
12 chr19:20960000-20967600 Weak transcription Adipose Nuclei Adipose
13 chr19:20960000-20968000 Weak transcription Colonic Mucosa Colon
14 chr19:20960000-20975600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr19:20960000-20976200 Weak transcription H9 Cell Line embryonic stem cell
16 chr19:20960000-20976600 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr19:20960000-20977600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr19:20960000-20977600 Weak transcription Brain Hippocampus Middle brain
19 chr19:20960000-20978000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr19:20960000-20978200 Weak transcription Pancreas Pancrea
21 chr19:20960000-20978400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr19:20960000-20978400 Weak transcription Brain Cingulate Gyrus brain
23 chr19:20960000-20978400 Weak transcription HSMM muscle
24 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
26 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
27 chr19:20960200-20965200 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr19:20960200-20966400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
29 chr19:20960200-20966400 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr19:20960200-20966600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr19:20960200-20966600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr19:20960200-20966600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr19:20960200-20966600 Weak transcription Fetal Kidney kidney
34 chr19:20960200-20967600 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr19:20960200-20967800 Weak transcription HepG2 liver
36 chr19:20960200-20968200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr19:20960200-20979600 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr19:20960200-20979600 Weak transcription NH-A brain
39 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
40 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr19:20960800-20964600 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr19:20960800-20976600 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr19:20961000-20965000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr19:20961000-20965400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr19:20961000-20973600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr19:20961200-20965000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr19:20961800-20964800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr19:20962200-20965000 ZNF genes & repeats Thymus Thymus
50 chr19:20962400-20978400 Weak transcription Osteobl bone

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