Variant report

Variant rs11669970
Chromosome Location chr19:20978464-20978465
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
3 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:20960200-20979600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr19:20960200-20979600 Weak transcription NH-A brain
6 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
7 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr19:20966800-20978600 Weak transcription Placenta Placenta
11 chr19:20968200-20978600 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr19:20968400-20979600 Weak transcription Rectal Smooth Muscle rectum
13 chr19:20968400-20980600 Weak transcription Colonic Mucosa Colon
14 chr19:20969600-20981000 Weak transcription Psoas Muscle Psoas
15 chr19:20971000-20980600 Weak transcription Muscle Satellite Cultured Cells --
16 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr19:20975000-20978800 Weak transcription Right Ventricle heart
18 chr19:20975200-20979600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr19:20975200-20982200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr19:20975200-20983600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
21 chr19:20975200-20983600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
22 chr19:20975200-20984800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
23 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
24 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
25 chr19:20975400-20979000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
26 chr19:20975400-20982000 Weak transcription Brain Anterior Caudate brain
27 chr19:20975600-20980200 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr19:20975600-20981600 ZNF genes & repeats Brain Germinal Matrix brain
29 chr19:20975600-20984400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr19:20975600-20984800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
31 chr19:20975600-20985400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
32 chr19:20975600-20989200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
33 chr19:20975800-20978800 ZNF genes & repeats GM12878-XiMat blood
34 chr19:20975800-20981200 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr19:20976200-20982800 Strong transcription Primary T helper naive cells from peripheral blood blood
36 chr19:20976200-20983400 ZNF genes & repeats Thymus Thymus
37 chr19:20976200-20983600 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
38 chr19:20976400-20979200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
39 chr19:20976400-20980000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr19:20976400-20985000 ZNF genes & repeats Fetal Lung lung
41 chr19:20976600-20978600 Weak transcription HSMMtube muscle
42 chr19:20976600-20979600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr19:20976600-20979800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr19:20976600-20980600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
45 chr19:20976600-20981200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr19:20976600-20981600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
47 chr19:20976600-20981800 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
48 chr19:20976600-20990800 ZNF genes & repeats Dnd41 blood
49 chr19:20976800-20978600 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr19:20976800-20978600 Weak transcription HMEC breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links