Variant report

Variant rs403107
Chromosome Location chr19:20983613-20983614
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
3 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
4 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
5 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr19:20974800-20992000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr19:20975200-20984800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:20975200-20989400 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr19:20975200-20992000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
12 chr19:20975600-20984400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr19:20975600-20984800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
14 chr19:20975600-20985400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
15 chr19:20975600-20989200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
16 chr19:20976400-20985000 ZNF genes & repeats Fetal Lung lung
17 chr19:20976600-20990800 ZNF genes & repeats Dnd41 blood
18 chr19:20976800-20990800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
19 chr19:20977000-20991200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
20 chr19:20977600-20991000 ZNF genes & repeats Primary T cells from cord blood blood
21 chr19:20977800-20984400 ZNF genes & repeats Fetal Brain Female brain
22 chr19:20977800-20990200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
23 chr19:20978200-20984800 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
24 chr19:20978400-20985000 ZNF genes & repeats Adipose Nuclei Adipose
25 chr19:20978400-20991200 ZNF genes & repeats H1 Cell Line embryonic stem cell
26 chr19:20978800-20987600 Weak transcription Brain Inferior Temporal Lobe brain
27 chr19:20979000-20984400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr19:20979000-20985600 Weak transcription Stomach Smooth Muscle stomach
29 chr19:20979000-20987200 Weak transcription Brain Cingulate Gyrus brain
30 chr19:20979200-20984800 Weak transcription Fetal Muscle Trunk muscle
31 chr19:20979800-20987600 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr19:20980000-20984600 ZNF genes & repeats Primary monocytes fromperipheralblood blood
33 chr19:20980200-20984800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
34 chr19:20980600-20984200 Weak transcription Placenta Placenta
35 chr19:20981200-20991400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr19:20981600-20984400 Weak transcription Colonic Mucosa Colon
37 chr19:20982000-20987000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr19:20982200-20983800 Weak transcription Fetal Thymus thymus
39 chr19:20982200-20985800 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
40 chr19:20982600-20984000 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
41 chr19:20982600-20984800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr19:20982800-20984600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
43 chr19:20982800-20984800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
44 chr19:20982800-20984800 ZNF genes & repeats Brain Germinal Matrix brain
45 chr19:20982800-20984800 ZNF genes & repeats Small Intestine intestine
46 chr19:20982800-20985000 ZNF genes & repeats Primary B cells from peripheral blood blood
47 chr19:20982800-20985400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
48 chr19:20982800-20990800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
49 chr19:20982800-20991200 ZNF genes & repeats Duodenum Mucosa Duodenum
50 chr19:20983000-20984200 Weak transcription Fetal Stomach stomach

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