Variant report
Variant | rs366543 |
---|---|
Chromosome Location | chr19:20986683-20986684 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10401248 | 0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10402131 | 0.95[AMR][1000 genomes];0.87[EUR][1000 genomes] |
rs10404392 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10404727 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10406140 | 0.92[ASN][1000 genomes] |
rs10406291 | 0.92[ASN][1000 genomes] |
rs10406929 | 0.81[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10407397 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10407535 | 0.81[AMR][1000 genomes] |
rs10407914 | 0.81[AMR][1000 genomes] |
rs10408565 | 0.81[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10409135 | 0.81[AMR][1000 genomes] |
rs10409460 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10409905 | 0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10410391 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10410834 | 0.83[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10411095 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10411309 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10411707 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10411736 | 0.92[ASN][1000 genomes] |
rs10413052 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10413183 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10413187 | 0.92[ASN][1000 genomes] |
rs10413400 | 0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10413812 | 0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10414418 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs10414513 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10414532 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10415086 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10416047 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10418060 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs10420676 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10421506 | 0.92[ASN][1000 genomes] |
rs10423936 | 0.87[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10424583 | 0.87[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10424677 | 0.87[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10424824 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10424826 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10424930 | 0.87[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs10425098 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10425326 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs10425936 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs10426864 | 0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11666023 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs11667650 | 0.92[ASN][1000 genomes] |
rs11667747 | 0.92[ASN][1000 genomes] |
rs11668858 | 0.92[ASN][1000 genomes] |
rs11668917 | 0.92[ASN][1000 genomes] |
rs11669025 | 0.83[AFR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669878 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669907 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669935 | 0.82[AFR][1000 genomes];0.91[ASN][1000 genomes] |
rs11669957 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669965 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669970 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs11669976 | 1.00[ASN][1000 genomes] |
rs11671855 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs12971606 | 0.92[ASN][1000 genomes] |
rs13343397 | 0.92[ASN][1000 genomes] |
rs13343468 | 0.92[ASN][1000 genomes] |
rs13343535 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs13343536 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs13343577 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs13343589 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs13343627 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs13344843 | 0.92[ASN][1000 genomes] |
rs13345527 | 0.92[ASN][1000 genomes] |
rs1643761 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs1643762 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs1643764 | 0.86[AMR][1000 genomes] |
rs1643765 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs1650988 | 0.84[EUR][1000 genomes] |
rs2545171 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs2545176 | 0.86[AMR][1000 genomes] |
rs2545177 | 0.86[AMR][1000 genomes] |
rs2545178 | 0.86[AMR][1000 genomes] |
rs2545180 | 0.86[AMR][1000 genomes] |
rs2545181 | 0.86[AMR][1000 genomes] |
rs2545182 | 0.86[AMR][1000 genomes] |
rs2545183 | 0.86[AMR][1000 genomes] |
rs2545185 | 0.86[AMR][1000 genomes] |
rs2545186 | 0.82[AMR][1000 genomes] |
rs2545187 | 0.82[ASN][1000 genomes] |
rs2545191 | 0.86[AMR][1000 genomes] |
rs2545199 | 0.86[AMR][1000 genomes] |
rs2545209 | 0.86[AMR][1000 genomes] |
rs2545211 | 0.86[AMR][1000 genomes] |
rs2547151 | 0.82[ASN][1000 genomes] |
rs2547158 | 0.86[AMR][1000 genomes] |
rs2547160 | 0.86[AMR][1000 genomes] |
rs2547164 | 0.86[AMR][1000 genomes] |
rs2547172 | 0.82[ASN][1000 genomes] |
rs2547176 | 0.86[AMR][1000 genomes] |
rs2547177 | 0.86[AMR][1000 genomes] |
rs2547179 | 0.86[AMR][1000 genomes] |
rs2547182 | 0.86[AMR][1000 genomes] |
rs2547183 | 0.86[AMR][1000 genomes] |
rs2560962 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2560964 | 0.95[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs2560965 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs28501307 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs28593054 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs28669723 | 0.92[ASN][1000 genomes] |
rs28696188 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs28798674 | 0.86[AMR][1000 genomes] |
rs28809326 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs2909792 | 0.86[AMR][1000 genomes] |
rs35331171 | 1.00[ASN][1000 genomes] |
rs35668100 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs36056689 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs36147228 | 0.95[AMR][1000 genomes] |
rs365033 | 0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs365590 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs366949 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs367380 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs367687 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs370551 | 0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs372292 | 0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs372832 | 0.95[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs374762 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs376260 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs377534 | 0.86[AMR][1000 genomes] |
rs378757 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs379662 | 0.87[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs379677 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs379793 | 0.80[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs380432 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs380872 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs381605 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs381697 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs381831 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs383038 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs3867194 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs3867195 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs386969 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs388321 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs388994 | 0.86[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs390936 | 0.95[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs393723 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs396748 | 0.92[ASN][1000 genomes] |
rs397333 | 0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs397659 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs397742 | 0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs399611 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs401060 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4026034 | 0.81[AMR][1000 genomes] |
rs4026047 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs4026060 | 0.86[AMR][1000 genomes] |
rs4026061 | 0.86[AMR][1000 genomes] |
rs4026075 | 0.86[AMR][1000 genomes] |
rs402744 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs403107 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs405780 | 0.87[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs407762 | 0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs410827 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs416612 | 0.85[AFR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs417499 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs418388 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs420639 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs422367 | 0.86[AMR][1000 genomes] |
rs423379 | 0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs423952 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs423985 | 0.95[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs425249 | 0.83[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs427017 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs428385 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs428980 | 0.95[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs432119 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs432839 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs436200 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs436921 | 0.91[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs437812 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs438497 | 0.91[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs441123 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs441567 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs441874 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs441887 | 0.86[AMR][1000 genomes] |
rs442442 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs442635 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs443899 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs444905 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs445408 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs445649 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs445991 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs446398 | 0.95[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs446712 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs446784 | 0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs446838 | 0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs449866 | 0.86[AMR][1000 genomes] |
rs451441 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs452446 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs452453 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs453550 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs55946377 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs56015102 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs56039011 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs57910065 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs581768 | 0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs58207985 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs58224123 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs582295 | 0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs58638426 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs587132 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs587212 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs592822 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs597312 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs59765058 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs597751 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs598554 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs599458 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs599536 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs604552 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs60469577 | 0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[ASN][1000 genomes] |
rs604719 | 0.86[AMR][1000 genomes] |
rs606501 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs61067458 | 0.95[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs61177778 | 0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs61416021 | 0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs62106005 | 0.92[ASN][1000 genomes] |
rs62123853 | 0.92[ASN][1000 genomes] |
rs62123854 | 0.92[ASN][1000 genomes] |
rs62123855 | 0.92[ASN][1000 genomes] |
rs62123856 | 0.92[ASN][1000 genomes] |
rs62123858 | 0.92[ASN][1000 genomes] |
rs62123859 | 0.92[ASN][1000 genomes] |
rs62125574 | 0.92[ASN][1000 genomes] |
rs624928 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs626458 | 0.86[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs646196 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs648941 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs648964 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs649276 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs652215 | 0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs652223 | 0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs652538 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs652570 | 0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs661487 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs661895 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs662391 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs66478629 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs666312 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs666382 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs668184 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs66914933 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs669424 | 0.95[AMR][1000 genomes];0.85[EUR][1000 genomes] |
rs669804 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs669823 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs670308 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs67340034 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs67452168 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs67501846 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs67666680 | 0.86[AMR][1000 genomes] |
rs67816767 | 0.86[AMR][1000 genomes] |
rs67914199 | 0.86[AMR][1000 genomes] |
rs679834 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs687480 | 0.95[AMR][1000 genomes];0.86[EUR][1000 genomes] |
rs7245851 | 0.92[ASN][1000 genomes] |
rs7246069 | 0.92[ASN][1000 genomes] |
rs7246079 | 0.92[ASN][1000 genomes] |
rs7246426 | 0.92[ASN][1000 genomes] |
rs7246470 | 0.92[ASN][1000 genomes] |
rs7246581 | 0.92[ASN][1000 genomes] |
rs7246796 | 0.82[ASN][1000 genomes] |
rs7246937 | 0.82[ASN][1000 genomes] |
rs7246956 | 0.92[ASN][1000 genomes] |
rs7247134 | 0.82[ASN][1000 genomes] |
rs7247466 | 0.92[ASN][1000 genomes] |
rs7251588 | 0.92[ASN][1000 genomes] |
rs7251612 | 0.92[ASN][1000 genomes] |
rs7251614 | 0.92[ASN][1000 genomes] |
rs73007842 | 0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73007847 | 0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73007849 | 0.83[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73009707 | 0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73009718 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73009738 | 0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs73013290 | 0.86[AMR][1000 genomes] |
rs73530585 | 0.82[AMR][1000 genomes] |
rs7507484 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs7507509 | 0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9783961 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9783963 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9783965 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs9783966 | 0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes] |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv911325 | chr19:20151257-21071548 | ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 49 gene(s) | inside rSNPs | diseases |
2 | nsv530804 | chr19:20574295-21001349 | Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 21 gene(s) | inside rSNPs | diseases |
3 | nsv458510 | chr19:20818886-20987550 | Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
4 | nsv578910 | chr19:20818886-20987550 | Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
5 | nsv578917 | chr19:20818886-20989873 | Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
6 | nsv578918 | chr19:20818886-21008212 | ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
7 | esv3447275 | chr19:20818886-21030779 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 13 gene(s) | inside rSNPs | diseases |
8 | esv2752729 | chr19:20818886-21169554 | ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 19 gene(s) | inside rSNPs | diseases |
9 | nsv1062776 | chr19:20818886-21273361 | Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
10 | nsv932110 | chr19:20818886-21278952 | Weak transcription ZNF genes & repeats Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
11 | esv2763043 | chr19:20818886-21290543 | Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 32 gene(s) | inside rSNPs | diseases |
12 | esv3693420 | chr19:20845947-20987550 | Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
13 | nsv517256 | chr19:20845947-20987550 | Strong transcription ZNF genes & repeats Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
14 | nsv458514 | chr19:20845947-20987550 | Active TSS ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
15 | nsv458515 | chr19:20845947-20987550 | Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
16 | nsv458516 | chr19:20845947-20987550 | Strong transcription Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
17 | nsv458517 | chr19:20845947-20987550 | Active TSS Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
18 | nsv458519 | chr19:20845947-20987550 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
19 | nsv458520 | chr19:20845947-20987550 | Weak transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
20 | nsv458521 | chr19:20845947-20987550 | ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
21 | nsv458522 | chr19:20845947-20987550 | Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
22 | nsv458523 | chr19:20845947-20987550 | ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
23 | nsv578923 | chr19:20845947-20987550 | Strong transcription Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
24 | nsv578931 | chr19:20845947-20987550 | ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
25 | nsv578925 | chr19:20845947-20989873 | Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
26 | nsv578927 | chr19:20845947-20989873 | ZNF genes & repeats Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
27 | nsv578932 | chr19:20845947-20989873 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
28 | nsv578937 | chr19:20845947-20989873 | Strong transcription ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
29 | nsv578924 | chr19:20845947-20990455 | Active TSS Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
30 | nsv578928 | chr19:20845947-20990455 | Weak transcription Active TSS ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
31 | nsv578933 | chr19:20845947-20990455 | Weak transcription ZNF genes & repeats Strong transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
32 | nsv578938 | chr19:20845947-20990455 | Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
33 | nsv1065615 | chr19:20845947-20997025 | Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
34 | nsv1056551 | chr19:20845947-20997977 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
35 | nsv578934 | chr19:20845947-21001176 | Active TSS ZNF genes & repeats Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
36 | nsv911409 | chr19:20845947-21001176 | ZNF genes & repeats Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
37 | esv3338155 | chr19:20845947-21015656 | Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
38 | esv3319109 | chr19:20845947-21015695 | Strong transcription ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
39 | esv3319110 | chr19:20845947-21015695 | Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
40 | nsv1056154 | chr19:20845947-21021053 | Enhancers ZNF genes & repeats Strong transcription Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
41 | nsv543940 | chr19:20845947-21021053 | Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
42 | nsv1067170 | chr19:20845947-21041038 | Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
43 | nsv458512 | chr19:20845947-21041350 | Enhancers ZNF genes & repeats Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
44 | nsv578926 | chr19:20845947-21041350 | Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
45 | nsv578935 | chr19:20845947-21048883 | Strong transcription ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
46 | nsv578936 | chr19:20845947-21049204 | Weak transcription ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
47 | nsv1064103 | chr19:20845947-21062996 | ZNF genes & repeats Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
48 | nsv432036 | chr19:20851860-21001960 | ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
49 | nsv458524 | chr19:20856454-20987550 | Weak transcription ZNF genes & repeats Strong transcription Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
50 | nsv578940 | chr19:20856454-20987550 | ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:20960000-20987600 | Weak transcription | Brain Substantia Nigra | brain |
2 | chr19:20960000-20987800 | Weak transcription | Placenta Amnion | Placenta Amnion |
3 | chr19:20960200-20987200 | Weak transcription | Colon Smooth Muscle | Colon |
4 | chr19:20960200-20990400 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
5 | chr19:20961200-20989600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
6 | chr19:20974800-20992000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
7 | chr19:20975200-20989400 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
8 | chr19:20975200-20992000 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
9 | chr19:20975600-20989200 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
10 | chr19:20976600-20990800 | ZNF genes & repeats | Dnd41 | blood |
11 | chr19:20976800-20990800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
12 | chr19:20977000-20991200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
13 | chr19:20977600-20991000 | ZNF genes & repeats | Primary T cells from cord blood | blood |
14 | chr19:20977800-20990200 | ZNF genes & repeats | Cortex derived primary cultured neurospheres | brain |
15 | chr19:20978400-20991200 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
16 | chr19:20978800-20987600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
17 | chr19:20979000-20987200 | Weak transcription | Brain Cingulate Gyrus | brain |
18 | chr19:20979800-20987600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
19 | chr19:20981200-20991400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
20 | chr19:20982000-20987000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
21 | chr19:20982800-20990800 | ZNF genes & repeats | Primary T regulatory cells fromperipheralblood | blood |
22 | chr19:20982800-20991200 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
23 | chr19:20983000-20987600 | Weak transcription | Brain Anterior Caudate | brain |
24 | chr19:20983400-20987000 | Weak transcription | Right Ventricle | heart |
25 | chr19:20983400-20987200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
26 | chr19:20983400-20988000 | Weak transcription | Brain Hippocampus Middle | brain |
27 | chr19:20983600-20987200 | Weak transcription | Osteobl | bone |
28 | chr19:20983600-20988000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
29 | chr19:20984400-20988800 | ZNF genes & repeats | Primary neutrophils fromperipheralblood | blood |
30 | chr19:20984400-20990800 | ZNF genes & repeats | Monocytes-CD14+_RO01746 | blood |
31 | chr19:20984600-20987000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
32 | chr19:20984600-20987000 | Weak transcription | H9 Cell Line | embryonic stem cell |
33 | chr19:20984600-20987000 | Weak transcription | Esophagus | oesophagus |
34 | chr19:20984600-20987000 | Weak transcription | Fetal Stomach | stomach |
35 | chr19:20984600-20987000 | Weak transcription | Lung | lung |
36 | chr19:20984600-20987000 | Weak transcription | Ovary | ovary |
37 | chr19:20984600-20987000 | Weak transcription | Thymus | Thymus |
38 | chr19:20984800-20987000 | Weak transcription | Brain Germinal Matrix | brain |
39 | chr19:20984800-20987200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
40 | chr19:20984800-20987200 | Weak transcription | Pancreas | Pancrea |
41 | chr19:20984800-20987200 | Weak transcription | Psoas Muscle | Psoas |
42 | chr19:20984800-20987200 | Weak transcription | Small Intestine | intestine |
43 | chr19:20985000-20987000 | Weak transcription | Adipose Nuclei | Adipose |
44 | chr19:20985200-20987200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
45 | chr19:20985400-20986800 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
46 | chr19:20985400-20987200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
47 | chr19:20985800-20988400 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
48 | chr19:20986400-20989000 | ZNF genes & repeats | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
49 | chr19:20986400-20989400 | ZNF genes & repeats | Primary T cells fromperipheralblood | blood |
50 | chr19:20986400-20990800 | ZNF genes & repeats | Primary T helper cells PMA-I stimulated | -- |