The 2.0 version of rSNPBase

Variant report

Variant rs10912497
Chromosome Location chr1:172899682-172899683
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172895800-172900000 Enhancers Muscle Satellite Cultured Cells --
2 chr1:172895800-172901600 Weak transcription K562 blood
3 chr1:172895800-172902200 Weak transcription Stomach Mucosa stomach
4 chr1:172896400-172899800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:172896600-172899800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:172896600-172900200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:172897000-172899800 Enhancers Breast Myoepithelial Primary Cells Breast
8 chr1:172897400-172903000 Weak transcription Esophagus oesophagus
9 chr1:172897600-172902200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:172897600-172903000 Weak transcription Stomach Smooth Muscle stomach
11 chr1:172897800-172903000 Weak transcription Fetal Stomach stomach
12 chr1:172898200-172899800 Enhancers NHEK skin
13 chr1:172898200-172901800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:172898400-172903400 Weak transcription Rectal Smooth Muscle rectum
15 chr1:172898600-172900800 Weak transcription HSMM muscle
16 chr1:172898600-172901600 Weak transcription Hela-S3 cervix
17 chr1:172898600-172902200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:172899000-172901800 Weak transcription Placenta Placenta
19 chr1:172899200-172900600 Weak transcription HUVEC blood vessel
20 chr1:172899200-172900800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:172899200-172902000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr1:172899200-172902200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:172899200-172903200 Weak transcription NH-A brain
24 chr1:172899400-172901400 Weak transcription A549 lung
25 chr1:172899600-172900800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:172899600-172900800 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:172899600-172900800 Weak transcription NHLF lung
28 chr1:172899600-172901400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:172899600-172901400 Weak transcription NHDF-Ad bronchial
30 chr1:172899600-172901800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:172899600-172901800 Weak transcription HMEC breast
32 chr1:172899600-172901800 Weak transcription Osteobl bone
33 chr1:172899600-172903200 Weak transcription Colon Smooth Muscle Colon
34 chr1:172899600-172903200 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015