The 2.0 version of rSNPBase

Variant report

Variant rs11169505
Chromosome Location chr12:51006268-51006269
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50974000-51011800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr12:50979200-51013800 Weak transcription Fetal Stomach stomach
3 chr12:50991400-51006600 Weak transcription Esophagus oesophagus
4 chr12:50991600-51009600 Weak transcription Rectal Smooth Muscle rectum
5 chr12:50991600-51014000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr12:50991800-51006800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr12:50992000-51006600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr12:50992400-51006600 Weak transcription Psoas Muscle Psoas
9 chr12:50992400-51007200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr12:50992400-51007400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr12:50992400-51007400 Weak transcription Dnd41 blood
12 chr12:50992400-51009200 Weak transcription Fetal Thymus thymus
13 chr12:50992400-51009600 Weak transcription Thymus Thymus
14 chr12:50992400-51015200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr12:50992800-51006800 Weak transcription HSMM muscle
16 chr12:50992800-51007200 Weak transcription Hela-S3 cervix
17 chr12:50993000-51013800 Weak transcription Primary T cells fromperipheralblood blood
18 chr12:50993000-51013800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr12:50993600-51007200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr12:50993600-51013400 Weak transcription GM12878-XiMat blood
21 chr12:50994400-51012400 Weak transcription Primary T cells from cord blood blood
22 chr12:50994600-51018600 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr12:50996000-51006600 Weak transcription Primary B cells from cord blood blood
24 chr12:50997200-51007800 Weak transcription Fetal Kidney kidney
25 chr12:50997600-51013000 Weak transcription Stomach Smooth Muscle stomach
26 chr12:50997600-51014200 Weak transcription Spleen Spleen
27 chr12:50998000-51006600 Weak transcription NH-A brain
28 chr12:50998000-51007400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr12:50998000-51007600 Weak transcription Muscle Satellite Cultured Cells --
30 chr12:50998000-51012000 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr12:50998400-51007200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr12:50998400-51007800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr12:50998600-51006800 Weak transcription Right Ventricle heart
34 chr12:50998600-51006800 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr12:50998600-51008200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr12:50998600-51013000 Weak transcription Gastric stomach
37 chr12:50999400-51006600 Weak transcription NHEK skin
38 chr12:50999600-51006600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr12:51000200-51006800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr12:51000800-51006800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr12:51001000-51012000 Weak transcription Fetal Intestine Large intestine
42 chr12:51001400-51006400 Weak transcription HepG2 liver
43 chr12:51001400-51009400 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr12:51001400-51012800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr12:51001600-51006600 Weak transcription Pancreatic Islets Pancreatic Islet
46 chr12:51001600-51007800 Weak transcription A549 lung
47 chr12:51002400-51008000 Weak transcription Pancreas Pancrea
48 chr12:51003400-51006800 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr12:51003600-51006600 Weak transcription Liver Liver
50 chr12:51003600-51006600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015