Variant report

Variant	rs11504784
Chromosome Location	chr18:29978378-29978379
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10502591	0.94[EUR][1000 genomes]
rs10502594	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10502600	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs10853420	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11504783	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11872355	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11872811	0.84[ASN][1000 genomes]
rs11874036	0.84[ASN][1000 genomes]
rs11876823	0.84[ASN][1000 genomes]
rs13381184	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16963314	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16963351	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16963353	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16963360	0.90[EUR][1000 genomes]
rs16963365	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16963373	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16963382	0.82[EUR][1000 genomes]
rs17736440	0.81[EUR][1000 genomes]
rs17736489	0.94[EUR][1000 genomes]
rs1841119	0.84[ASN][1000 genomes]
rs3073261	0.81[EUR][1000 genomes]
rs4644922	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs55730180	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs58220828	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59630704	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs60214917	0.81[EUR][1000 genomes]
rs73954805	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73954806	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73954807	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73956898	0.81[EUR][1000 genomes]
rs73958413	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73958418	0.96[EUR][1000 genomes]
rs73958422	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3347612	chr18:29975003-29990362	Enhancers Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:29963600-29999200	Weak transcription	Fetal Kidney	kidney
2	chr18:29964800-29985400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr18:29966600-29981400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr18:29966800-29985400	Weak transcription	Right Ventricle	heart
5	chr18:29967000-29986600	Weak transcription	Brain Angular Gyrus	brain

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