Variant report

Variant	rs59630704
Chromosome Location	chr18:30020252-30020253
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:30019884..30022192-chr18:30026539..30028590,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10502591	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10502594	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10502600	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10853420	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11081757	0.81[ASN][1000 genomes]
rs11504783	0.80[AMR][1000 genomes]
rs11504784	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11872355	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs13381184	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16963314	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16963351	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16963353	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16963360	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16963365	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16963373	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16963382	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs17736440	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17736489	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3073261	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4644922	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55730180	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs55861080	0.81[ASN][1000 genomes]
rs55976613	0.81[ASN][1000 genomes]
rs57230958	0.81[ASN][1000 genomes]
rs57546420	0.81[ASN][1000 genomes]
rs58220828	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58435646	0.81[ASN][1000 genomes]
rs58863502	0.81[ASN][1000 genomes]
rs59340191	0.81[ASN][1000 genomes]
rs59452754	0.81[ASN][1000 genomes]
rs60154857	0.81[ASN][1000 genomes]
rs60214917	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60949633	0.81[ASN][1000 genomes]
rs73954805	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73954806	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73954807	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73956875	0.81[ASN][1000 genomes]
rs73956877	0.81[ASN][1000 genomes]
rs73956878	0.81[ASN][1000 genomes]
rs73956881	0.84[ASN][1000 genomes]
rs73956882	0.84[ASN][1000 genomes]
rs73956890	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73956898	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73958413	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73958418	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73958422	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30012800-30021800	Enhancers	Fetal Heart	heart
2	chr18:30015600-30020400	Enhancers	Brain Hippocampus Middle	brain
3	chr18:30015800-30021200	Weak transcription	Fetal Lung	lung
4	chr18:30016800-30020800	Enhancers	Brain Substantia Nigra	brain
5	chr18:30017000-30020400	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr18:30017000-30020600	Enhancers	Brain Cingulate Gyrus	brain
7	chr18:30017000-30021600	Enhancers	Fetal Brain Male	brain
8	chr18:30017200-30021200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr18:30017600-30021600	Weak transcription	Rectal Smooth Muscle	rectum
10	chr18:30018000-30021400	Weak transcription	Colon Smooth Muscle	Colon
11	chr18:30018200-30020800	Enhancers	Stomach Mucosa	stomach
12	chr18:30018200-30021800	Weak transcription	Fetal Intestine Small	intestine
13	chr18:30018400-30020600	Weak transcription	Fetal Kidney	kidney
14	chr18:30018600-30020600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr18:30018600-30021400	Weak transcription	Liver	Liver
16	chr18:30018600-30021600	Weak transcription	Fetal Muscle Trunk	muscle
17	chr18:30019000-30020600	Weak transcription	Ovary	ovary
18	chr18:30019000-30021400	Weak transcription	Psoas Muscle	Psoas
19	chr18:30019000-30021400	Weak transcription	Stomach Smooth Muscle	stomach
20	chr18:30019000-30023400	Weak transcription	Right Ventricle	heart
21	chr18:30019000-30024200	Weak transcription	Pancreas	Pancrea
22	chr18:30019000-30028400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
23	chr18:30019200-30020400	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr18:30019200-30023400	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr18:30019400-30020600	Enhancers	Brain Anterior Caudate	brain
26	chr18:30019400-30021600	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr18:30019600-30021000	Enhancers	Fetal Brain Female	brain
28	chr18:30019600-30021400	Weak transcription	Aorta	Aorta
29	chr18:30019800-30020400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
30	chr18:30019800-30021400	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr18:30020000-30020600	Weak transcription	Left Ventricle	heart
32	chr18:30020000-30020600	Weak transcription	Right Atrium	heart
33	chr18:30020000-30021000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr18:30020000-30021400	Weak transcription	Brain Angular Gyrus	brain
35	chr18:30020000-30032000	Weak transcription	Gastric	stomach
36	chr18:30020200-30021600	Weak transcription	Adipose Nuclei	Adipose

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