Variant report

Variant	rs11716582
Chromosome Location	chr3:47633759-47633760
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:47628133..47631502-chr3:47631927..47635228,5	K562	blood:
2	chr3:47618730..47621419-chr3:47632641..47634431,2	K562	blood:
3	chr3:47619919..47622877-chr3:47631926..47634141,2	K562	blood:

Variant related genes	Relation type
ENSG00000114646	Chromatin interaction

Extended variants
information (count: 141 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:141)

rs_ID	r²[population]
rs1014228	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[GIH][hapmap];0.94[LWK][hapmap];0.89[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs10865948	0.88[CEU][hapmap];0.94[CHB][hapmap];0.85[YRI][hapmap];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11130138	0.88[ASW][hapmap];0.88[CEU][hapmap];0.94[CHB][hapmap];0.98[GIH][hapmap];0.86[MEX][hapmap];0.83[MKK][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11130139	0.92[CEU][hapmap];0.93[YRI][hapmap];0.92[EUR][1000 genomes]
rs11130143	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11130144	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11130145	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11130146	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11130147	0.86[AMR][1000 genomes]
rs11130148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes]
rs11708849	0.80[AMR][1000 genomes]
rs11712152	0.85[EUR][1000 genomes]
rs11712464	1.00[CEU][hapmap];0.89[CHD][hapmap];0.83[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap]
rs11714942	0.87[AMR][1000 genomes]
rs11929303	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12489865	1.00[ASW][hapmap];1.00[CEU][hapmap];0.86[GIH][hapmap];0.88[TSI][hapmap];0.96[YRI][hapmap];0.83[EUR][1000 genomes]
rs12492915	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12495204	0.83[ASW][hapmap];0.96[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs12497921	0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12498027	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12633604	0.85[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12635438	1.00[CEU][hapmap];0.84[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap]
rs12636198	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12636863	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13061412	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13063042	0.87[ASW][hapmap];1.00[CEU][hapmap];0.80[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.86[AMR][1000 genomes]
rs13064183	0.87[AMR][1000 genomes]
rs13069142	0.87[EUR][1000 genomes]
rs13070035	0.83[AMR][1000 genomes]
rs13081356	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13084555	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13085978	0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13086149	0.90[AMR][1000 genomes]
rs13091913	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.92[TSI][hapmap];0.84[AMR][1000 genomes]
rs13094264	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes]
rs13098128	0.86[AMR][1000 genomes]
rs1403578	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1403579	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1464614	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1486915	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.86[AMR][1000 genomes]
rs17079785	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs2030596	0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2047559	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2049300	0.95[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs2049301	0.83[AMR][1000 genomes]
rs2101398	0.81[AMR][1000 genomes]
rs2133601	0.88[ASW][hapmap];0.92[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];0.89[LWK][hapmap];0.88[MKK][hapmap];0.92[TSI][hapmap];0.96[YRI][hapmap];0.86[AMR][1000 genomes]
rs2140335	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2280567	1.00[CEU][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs2293226	0.88[ASW][hapmap];1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];0.94[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2351248	0.82[CEU][hapmap];0.84[CHB][hapmap];0.89[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.89[TSI][hapmap]
rs2882611	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34252990	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34351471	0.87[AMR][1000 genomes]
rs34569417	0.81[AMR][1000 genomes]
rs34616865	0.94[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs34777284	0.83[AMR][1000 genomes]
rs34906469	0.82[AMR][1000 genomes]
rs35148469	0.87[AMR][1000 genomes]
rs35167544	0.86[EUR][1000 genomes]
rs35698005	0.89[AMR][1000 genomes]
rs36033865	0.82[EUR][1000 genomes]
rs3732530	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs3755637	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];0.88[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3755638	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3772399	0.85[AMR][1000 genomes]
rs3772403	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3888	0.82[AMR][1000 genomes]
rs3915654	0.85[AMR][1000 genomes]
rs4274776	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4410463	0.83[AMR][1000 genomes]
rs4858801	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4858803	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4858835	0.84[AMR][1000 genomes]
rs4858836	0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4858842	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4858846	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4858851	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes]
rs4858857	0.86[AMR][1000 genomes]
rs4858860	0.82[AMR][1000 genomes]
rs56746603	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60110914	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60322343	0.93[EUR][1000 genomes]
rs61181421	0.86[AMR][1000 genomes]
rs61620099	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs61675361	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62262129	0.85[AMR][1000 genomes]
rs6442070	0.84[AMR][1000 genomes]
rs6442071	0.82[AMR][1000 genomes]
rs6442072	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6442074	0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6442079	0.81[AMR][1000 genomes]
rs6442081	0.83[AMR][1000 genomes]
rs6442082	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.95[MEX][hapmap];0.92[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs6442083	0.87[AMR][1000 genomes]
rs6442085	0.86[AMR][1000 genomes]
rs6767896	0.91[AMR][1000 genomes]
rs6767996	0.83[AMR][1000 genomes]
rs6768699	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs6772301	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.86[AMR][1000 genomes]
rs6773467	0.83[AMR][1000 genomes]
rs6773732	0.83[AMR][1000 genomes]
rs6774170	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6776963	0.96[CEU][hapmap];0.84[CHB][hapmap];0.89[CHD][hapmap];0.83[GIH][hapmap];0.94[JPT][hapmap];0.82[MEX][hapmap];0.95[TSI][hapmap]
rs6777632	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes]
rs6780395	0.85[AMR][1000 genomes]
rs6782707	0.81[AMR][1000 genomes]
rs6784946	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6785031	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6785669	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes]
rs6786001	0.83[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs6789835	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6792350	0.85[AMR][1000 genomes]
rs6792497	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes]
rs6792737	0.87[AMR][1000 genomes]
rs6806860	0.89[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.89[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs72906488	0.84[AMR][1000 genomes]
rs7429162	0.84[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes]
rs7612219	0.87[AMR][1000 genomes]
rs7613934	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7618758	0.83[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.87[AMR][1000 genomes]
rs7621236	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7624474	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7631950	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7637372	0.89[AMR][1000 genomes]
rs7637950	0.85[AMR][1000 genomes]
rs7638103	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap];0.83[AMR][1000 genomes]
rs7642691	0.90[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7645846	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes]
rs7646982	0.82[AMR][1000 genomes]
rs7649393	0.83[AMR][1000 genomes]
rs868255	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs869508	1.00[CEU][hapmap];0.84[CHB][hapmap];0.81[CHD][hapmap];0.85[GIH][hapmap];0.82[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs870622	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs883661	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs883662	1.00[CEU][hapmap];0.93[JPT][hapmap];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs883663	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9311409	0.81[AMR][1000 genomes]
rs9681917	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.92[TSI][hapmap]
rs9757517	0.84[AMR][1000 genomes]
rs9820051	0.84[AMR][1000 genomes]

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs11716582	HYAL2	cis	cerebellum	SCAN
rs11716582	DHX30	Cis_1M	lymphoblastoid	RTeQTL
rs11716582	MAP4	Cis_1M	lymphoblastoid	RTeQTL
rs11716582	NME6	cis	Esophagus Muscularis	GTEx
rs11716582	ZNF589	cis	parietal	SCAN
rs11716582	MRPS18AP1	cis	Muscle Skeletal	GTEx
rs11716582	MRPS18AP1	cis	lung	GTEx
rs11716582	ZNF589	cis	cerebellum	SCAN
rs11716582	MRPS18AP1	cis	Nerve Tibial	GTEx
rs11716582	SMARCC1	cis	cerebellum	SCAN
rs11716582	ATRIP	cis	cerebellum	SCAN
rs11716582	ZNF589	cis	Nerve Tibial	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:47621000-47651600	Weak transcription	Right Atrium	heart
2	chr3:47621000-47653400	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr3:47622600-47653400	Weak transcription	Stomach Mucosa	stomach
4	chr3:47623400-47655000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr3:47624000-47653200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr3:47624200-47636200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr3:47625000-47637200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
8	chr3:47625400-47651400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr3:47625600-47651200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr3:47626000-47634400	Strong transcription	Primary T cells from cord blood	blood
11	chr3:47626000-47641200	Strong transcription	Fetal Thymus	thymus
12	chr3:47626200-47698600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr3:47626400-47636600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr3:47626400-47642600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr3:47626400-47655600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr3:47626400-47680600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr3:47626600-47634400	Strong transcription	Dnd41	blood
18	chr3:47626600-47635800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
19	chr3:47626600-47636000	Strong transcription	HUES48 Cell Line	embryonic stem cell
20	chr3:47626600-47636600	Strong transcription	K562	blood
21	chr3:47626600-47637800	Strong transcription	Monocytes-CD14+_RO01746	blood
22	chr3:47626600-47688600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr3:47626600-47699800	Strong transcription	HUES64 Cell Line	embryonic stem cell
24	chr3:47626800-47636600	Strong transcription	Primary B cells from peripheral blood	blood
25	chr3:47626800-47636800	Strong transcription	HUES6 Cell Line	embryonic stem cell
26	chr3:47626800-47636800	Strong transcription	Primary monocytes fromperipheralblood	blood
27	chr3:47626800-47636800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr3:47626800-47680800	Strong transcription	Primary T cells fromperipheralblood	blood
29	chr3:47627000-47633800	Strong transcription	Primary T helper cells fromperipheralblood	blood
30	chr3:47627000-47636600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
31	chr3:47627000-47636800	Strong transcription	Hela-S3	cervix
32	chr3:47627000-47638400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr3:47627200-47634400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr3:47628000-47634200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr3:47629600-47633800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr3:47631000-47650000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr3:47631200-47642600	Weak transcription	Brain Angular Gyrus	brain
38	chr3:47631200-47650200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
39	chr3:47631400-47644200	Weak transcription	Psoas Muscle	Psoas
40	chr3:47631600-47636000	Weak transcription	NHEK	skin
41	chr3:47632000-47636000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
42	chr3:47632000-47639200	Weak transcription	Colon Smooth Muscle	Colon
43	chr3:47632000-47648800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
44	chr3:47632200-47633800	Weak transcription	GM12878-XiMat	blood
45	chr3:47632200-47635800	Weak transcription	NH-A	brain
46	chr3:47632200-47636000	Weak transcription	Fetal Brain Male	brain
47	chr3:47632200-47639200	Weak transcription	HSMMtube	muscle
48	chr3:47632200-47639400	Weak transcription	Rectal Mucosa Donor 31	rectum
49	chr3:47632200-47639800	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr3:47632200-47640600	Weak transcription	Rectal Smooth Muscle	rectum

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