The 2.0 version of rSNPBase

Variant report

Variant rs12047809
Chromosome Location chr1:220946030-220946031
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220922600-220946400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr1:220922800-220959600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:220922800-220959600 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:220923200-220948000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:220925000-220959400 Weak transcription Brain Angular Gyrus brain
6 chr1:220925400-220950200 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:220930000-220950000 Weak transcription Fetal Brain Male brain
8 chr1:220930000-220950200 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:220930000-220950400 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:220930000-220959600 Weak transcription Psoas Muscle Psoas
11 chr1:220930200-220950000 Weak transcription Brain Anterior Caudate brain
12 chr1:220930400-220950000 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:220930400-220959600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr1:220930600-220950000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:220931000-220946200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:220931200-220946600 Weak transcription HUVEC blood vessel
17 chr1:220931200-220959000 Weak transcription Brain Substantia Nigra brain
18 chr1:220936200-220959600 Weak transcription A549 lung
19 chr1:220936600-220958200 Weak transcription Esophagus oesophagus
20 chr1:220939000-220960400 Weak transcription Small Intestine intestine
21 chr1:220941200-220949800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:220941400-220948400 Strong transcription Fetal Muscle Leg muscle
23 chr1:220942200-220946800 Strong transcription Sigmoid Colon Sigmoid Colon
24 chr1:220942200-220948200 Strong transcription Fetal Stomach stomach
25 chr1:220942400-220950200 Weak transcription Right Atrium heart
26 chr1:220942400-220950200 Weak transcription Stomach Mucosa stomach
27 chr1:220942600-220946400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:220942800-220946200 Strong transcription Fetal Lung lung
29 chr1:220942800-220948200 Strong transcription Fetal Intestine Small intestine
30 chr1:220942800-220948800 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:220943000-220958400 Weak transcription HepG2 liver
32 chr1:220943000-220959000 Strong transcription Fetal Intestine Large intestine
33 chr1:220944000-220947800 Weak transcription Fetal Heart heart
34 chr1:220944200-220948400 Strong transcription Left Ventricle heart
35 chr1:220944200-220948800 Weak transcription Brain Cingulate Gyrus brain
36 chr1:220944200-220950000 Weak transcription Brain Inferior Temporal Lobe brain
37 chr1:220944200-220950000 Weak transcription Hela-S3 cervix
38 chr1:220944200-220950200 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr1:220944200-220956000 Weak transcription Pancreas Pancrea
40 chr1:220944200-220959200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr1:220944200-220959400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:220944200-220959400 Weak transcription Fetal Kidney kidney
43 chr1:220944200-220959600 Weak transcription NHLF lung
44 chr1:220944200-220959800 Weak transcription Gastric stomach
45 chr1:220944400-220946400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:220944400-220946400 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr1:220944400-220947000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:220944400-220947400 Strong transcription Liver Liver
49 chr1:220944400-220947400 Weak transcription Stomach Smooth Muscle stomach
50 chr1:220944400-220950200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015