The 2.0 version of rSNPBase

Variant report

Variant rs17008649
Chromosome Location chr1:220948716-220948717
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220922800-220959600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:220922800-220959600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:220925000-220959400 Weak transcription Brain Angular Gyrus brain
4 chr1:220925400-220950200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr1:220930000-220950000 Weak transcription Fetal Brain Male brain
6 chr1:220930000-220950200 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:220930000-220950400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:220930000-220959600 Weak transcription Psoas Muscle Psoas
9 chr1:220930200-220950000 Weak transcription Brain Anterior Caudate brain
10 chr1:220930400-220950000 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:220930400-220959600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:220930600-220950000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr1:220931200-220959000 Weak transcription Brain Substantia Nigra brain
14 chr1:220936200-220959600 Weak transcription A549 lung
15 chr1:220936600-220958200 Weak transcription Esophagus oesophagus
16 chr1:220939000-220960400 Weak transcription Small Intestine intestine
17 chr1:220941200-220949800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:220942400-220950200 Weak transcription Right Atrium heart
19 chr1:220942400-220950200 Weak transcription Stomach Mucosa stomach
20 chr1:220942800-220948800 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:220943000-220958400 Weak transcription HepG2 liver
22 chr1:220943000-220959000 Strong transcription Fetal Intestine Large intestine
23 chr1:220944200-220948800 Weak transcription Brain Cingulate Gyrus brain
24 chr1:220944200-220950000 Weak transcription Brain Inferior Temporal Lobe brain
25 chr1:220944200-220950000 Weak transcription Hela-S3 cervix
26 chr1:220944200-220950200 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr1:220944200-220956000 Weak transcription Pancreas Pancrea
28 chr1:220944200-220959200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:220944200-220959400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:220944200-220959400 Weak transcription Fetal Kidney kidney
31 chr1:220944200-220959600 Weak transcription NHLF lung
32 chr1:220944200-220959800 Weak transcription Gastric stomach
33 chr1:220944400-220950200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:220944400-220954600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:220944400-220956000 Weak transcription Aorta Aorta
36 chr1:220944400-220956800 Weak transcription Spleen Spleen
37 chr1:220944400-220958800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr1:220944400-220959000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:220944400-220959200 Weak transcription Rectal Smooth Muscle rectum
40 chr1:220944400-220959400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr1:220944400-220959400 Weak transcription Colonic Mucosa Colon
42 chr1:220944400-220959400 Weak transcription Right Ventricle heart
43 chr1:220945000-220950400 Weak transcription Fetal Muscle Trunk muscle
44 chr1:220945000-220951800 Weak transcription Ovary ovary
45 chr1:220945600-220953200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:220945800-220959200 Weak transcription Colon Smooth Muscle Colon
47 chr1:220946000-220956800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:220946200-220950400 Weak transcription Fetal Lung lung
49 chr1:220946200-220951600 Weak transcription Rectal Mucosa Donor 31 rectum
50 chr1:220946400-220953400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015