The 2.0 version of rSNPBase

Variant report

Variant rs12294921
Chromosome Location chr11:46915192-46915193
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46868600-46917400 Weak transcription Fetal Brain Male brain
2 chr11:46875600-46917200 Strong transcription Cortex derived primary cultured neurospheres brain
3 chr11:46876600-46916600 Strong transcription Breast Myoepithelial Primary Cells Breast
4 chr11:46877600-46919000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:46878400-46922000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr11:46879800-46918200 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr11:46886000-46921800 Weak transcription Hela-S3 cervix
8 chr11:46887600-46918600 Weak transcription NHDF-Ad bronchial
9 chr11:46895400-46917400 Weak transcription NHLF lung
10 chr11:46896600-46928200 Weak transcription Fetal Heart heart
11 chr11:46897400-46921800 Weak transcription HMEC breast
12 chr11:46897600-46916800 Weak transcription Psoas Muscle Psoas
13 chr11:46897600-46917200 Weak transcription Rectal Smooth Muscle rectum
14 chr11:46898600-46916600 Weak transcription Liver Liver
15 chr11:46898800-46916600 Weak transcription Gastric stomach
16 chr11:46898800-46920000 Weak transcription Stomach Mucosa stomach
17 chr11:46899000-46916000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr11:46900800-46923400 Weak transcription Aorta Aorta
19 chr11:46901400-46917400 Weak transcription NH-A brain
20 chr11:46905000-46917800 Weak transcription Right Atrium heart
21 chr11:46905600-46917400 Weak transcription Esophagus oesophagus
22 chr11:46905600-46922600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr11:46907000-46921200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr11:46908000-46915200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:46908000-46916200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr11:46908000-46916800 Weak transcription Lung lung
27 chr11:46908000-46917400 Weak transcription Colonic Mucosa Colon
28 chr11:46908200-46916600 Weak transcription Fetal Brain Female brain
29 chr11:46908400-46916000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr11:46908600-46916000 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr11:46908600-46916000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr11:46908600-46916800 Weak transcription Brain Angular Gyrus brain
33 chr11:46908800-46918000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr11:46910000-46918600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr11:46910400-46917400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:46910400-46919000 Strong transcription Duodenum Mucosa Duodenum
37 chr11:46911200-46915800 Weak transcription Placenta Placenta
38 chr11:46911200-46916000 Weak transcription H9 Cell Line embryonic stem cell
39 chr11:46911200-46916000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr11:46911200-46916000 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr11:46911200-46933800 Weak transcription Fetal Kidney kidney
42 chr11:46911600-46916600 Strong transcription Fetal Muscle Trunk muscle
43 chr11:46912000-46916000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr11:46912000-46916000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr11:46912000-46916000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr11:46912000-46916000 Weak transcription Fetal Lung lung
47 chr11:46912000-46916000 Weak transcription Pancreas Pancrea
48 chr11:46912000-46916000 Weak transcription HepG2 liver
49 chr11:46912000-46916000 Weak transcription HSMMtube muscle
50 chr11:46912000-46916000 Weak transcription NHEK skin

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Last update: Aug 31, 2015