Variant report
| Variant | rs12332554 |
|---|---|
| Chromosome Location | chr5:151161199-151161200 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:151152800-151163000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 2 | chr5:151153000-151167400 | Weak transcription | Esophagus | oesophagus |
| 3 | chr5:151153000-151167400 | Weak transcription | Lung | lung |
| 4 | chr5:151153000-151167600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 5 | chr5:151153800-151162000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 6 | chr5:151153800-151165200 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
| 7 | chr5:151153800-151166800 | Weak transcription | Colonic Mucosa | Colon |
| 8 | chr5:151153800-151167400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr5:151153800-151169800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 10 | chr5:151154400-151168800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr5:151154400-151169000 | Weak transcription | HSMMtube | muscle |
| 12 | chr5:151154600-151168800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 13 | chr5:151154800-151165000 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 14 | chr5:151155200-151163600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 15 | chr5:151155200-151167600 | Weak transcription | Spleen | Spleen |
| 16 | chr5:151155800-151163800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr5:151155800-151167400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 18 | chr5:151155800-151172200 | Weak transcription | Aorta | Aorta |
| 19 | chr5:151155800-151177000 | Weak transcription | Fetal Brain Male | brain |
| 20 | chr5:151156200-151166000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 21 | chr5:151156200-151167800 | Weak transcription | Brain Germinal Matrix | brain |
| 22 | chr5:151156800-151166800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 23 | chr5:151156800-151168200 | Weak transcription | NHLF | lung |
| 24 | chr5:151157000-151165800 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 25 | chr5:151157200-151166200 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 26 | chr5:151157400-151167200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 27 | chr5:151157600-151163400 | Weak transcription | Small Intestine | intestine |
| 28 | chr5:151157600-151165200 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 29 | chr5:151157800-151161800 | Weak transcription | NH-A | brain |
| 30 | chr5:151157800-151164000 | Weak transcription | Fetal Kidney | kidney |
| 31 | chr5:151157800-151166000 | Weak transcription | Thymus | Thymus |
| 32 | chr5:151158000-151161600 | Genic enhancers | Dnd41 | blood |
| 33 | chr5:151158000-151162000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr5:151158000-151163600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 35 | chr5:151158000-151164400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 36 | chr5:151158000-151165800 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 37 | chr5:151158000-151167200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr5:151158000-151168800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 39 | chr5:151158200-151163400 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 40 | chr5:151158200-151164000 | Enhancers | Primary T cells from cord blood | blood |
| 41 | chr5:151158200-151165600 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 42 | chr5:151158200-151166000 | Weak transcription | Placenta | Placenta |
| 43 | chr5:151158200-151166000 | Weak transcription | NHEK | skin |
| 44 | chr5:151158200-151167200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 45 | chr5:151158200-151171200 | Weak transcription | Right Ventricle | heart |
| 46 | chr5:151158600-151161800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 47 | chr5:151158600-151162200 | Enhancers | Liver | Liver |
| 48 | chr5:151158600-151165000 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 49 | chr5:151158600-151166200 | Weak transcription | Fetal Stomach | stomach |
| 50 | chr5:151158600-151167600 | Weak transcription | Fetal Muscle Trunk | muscle |
