Variant report
| Variant | rs16946035 |
|---|---|
| Chromosome Location | chr16:48288028-48288029 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr16:48279400-48312600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr16:48279600-48292200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr16:48279600-48292600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr16:48279600-48293400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 5 | chr16:48279600-48293400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr16:48279600-48294200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr16:48279600-48297200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr16:48279600-48311200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr16:48279600-48320200 | Weak transcription | Spleen | Spleen |
| 10 | chr16:48280400-48288600 | Weak transcription | Fetal Heart | heart |
| 11 | chr16:48280400-48288600 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr16:48280400-48288600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 13 | chr16:48280400-48289000 | Weak transcription | HUVEC | blood vessel |
| 14 | chr16:48280400-48292800 | Weak transcription | NHDF-Ad | bronchial |
| 15 | chr16:48280400-48293400 | Weak transcription | Colonic Mucosa | Colon |
| 16 | chr16:48280400-48293400 | Weak transcription | Thymus | Thymus |
| 17 | chr16:48280400-48293400 | Weak transcription | HSMMtube | muscle |
| 18 | chr16:48280400-48295400 | Weak transcription | Brain Germinal Matrix | brain |
| 19 | chr16:48280400-48296000 | Weak transcription | Fetal Brain Male | brain |
| 20 | chr16:48280400-48309400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 21 | chr16:48280800-48288600 | Weak transcription | Fetal Lung | lung |
| 22 | chr16:48280800-48292200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 23 | chr16:48280800-48304000 | Weak transcription | Hela-S3 | cervix |
| 24 | chr16:48281200-48291600 | Weak transcription | Fetal Brain Female | brain |
| 25 | chr16:48281400-48288200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 26 | chr16:48281400-48289000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 27 | chr16:48281400-48313200 | Weak transcription | Right Atrium | heart |
| 28 | chr16:48281600-48289000 | Weak transcription | Right Ventricle | heart |
| 29 | chr16:48281600-48290600 | Weak transcription | GM12878-XiMat | blood |
| 30 | chr16:48281600-48291000 | Weak transcription | Ovary | ovary |
| 31 | chr16:48281600-48292800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 32 | chr16:48281600-48293400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 33 | chr16:48281800-48288800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 34 | chr16:48281800-48289000 | Weak transcription | Aorta | Aorta |
| 35 | chr16:48281800-48289000 | Weak transcription | Gastric | stomach |
| 36 | chr16:48281800-48289200 | Weak transcription | Esophagus | oesophagus |
| 37 | chr16:48281800-48313200 | Weak transcription | Psoas Muscle | Psoas |
| 38 | chr16:48282000-48290400 | Weak transcription | HMEC | breast |
| 39 | chr16:48282200-48297200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 40 | chr16:48284200-48291600 | Weak transcription | Lung | lung |
| 41 | chr16:48284200-48291600 | Weak transcription | Pancreas | Pancrea |
| 42 | chr16:48285200-48294400 | Weak transcription | Colon Smooth Muscle | Colon |
| 43 | chr16:48285200-48309600 | Strong transcription | HepG2 | liver |
| 44 | chr16:48285400-48288600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr16:48285400-48290800 | Strong transcription | Primary T cells from cord blood | blood |
| 46 | chr16:48285400-48293400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 47 | chr16:48285600-48288600 | Weak transcription | NHEK | skin |
| 48 | chr16:48285600-48288800 | Weak transcription | Brain Angular Gyrus | brain |
| 49 | chr16:48285600-48290000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 50 | chr16:48285600-48292600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
