The 2.0 version of rSNPBase

Variant report

Variant rs16946055
Chromosome Location chr16:48309658-48309659
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48279400-48312600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:48279600-48311200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr16:48279600-48320200 Weak transcription Spleen Spleen
4 chr16:48281400-48313200 Weak transcription Right Atrium heart
5 chr16:48281800-48313200 Weak transcription Psoas Muscle Psoas
6 chr16:48286000-48313200 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr16:48287400-48320200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr16:48289400-48313200 Weak transcription Gastric stomach
9 chr16:48289400-48320400 Weak transcription Esophagus oesophagus
10 chr16:48290600-48313800 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr16:48292200-48313200 Weak transcription Pancreas Pancrea
12 chr16:48293800-48320400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr16:48294800-48320400 Weak transcription Lung lung
14 chr16:48297200-48323200 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr16:48297600-48311000 Weak transcription Colonic Mucosa Colon
16 chr16:48297600-48313200 Weak transcription K562 blood
17 chr16:48297600-48318600 Strong transcription Primary B cells from peripheral blood blood
18 chr16:48297600-48319800 Weak transcription H1 Cell Line embryonic stem cell
19 chr16:48297600-48321000 Weak transcription Fetal Brain Male brain
20 chr16:48297800-48311400 Weak transcription HSMMtube muscle
21 chr16:48297800-48312200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr16:48297800-48313200 Weak transcription H9 Cell Line embryonic stem cell
23 chr16:48297800-48313200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr16:48297800-48313200 Weak transcription NHEK skin
25 chr16:48297800-48319800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr16:48297800-48320800 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr16:48297800-48320800 Weak transcription Brain Germinal Matrix brain
28 chr16:48297800-48320800 Weak transcription Placenta Amnion Placenta Amnion
29 chr16:48297800-48320800 Weak transcription Small Intestine intestine
30 chr16:48299000-48320400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr16:48300200-48320200 Weak transcription Fetal Stomach stomach
32 chr16:48301200-48310200 Weak transcription NHDF-Ad bronchial
33 chr16:48302200-48313400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr16:48302800-48321000 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr16:48303000-48313400 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr16:48303000-48314800 Strong transcription Primary T cells fromperipheralblood blood
37 chr16:48303000-48315200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr16:48303200-48312000 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr16:48303400-48312400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr16:48303400-48314400 Strong transcription Dnd41 blood
41 chr16:48303600-48312400 Strong transcription Primary T cells from cord blood blood
42 chr16:48303800-48313800 Strong transcription Fetal Muscle Leg muscle
43 chr16:48304400-48311600 Weak transcription Left Ventricle heart
44 chr16:48304400-48317000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr16:48304800-48309800 Weak transcription Rectal Smooth Muscle rectum
46 chr16:48304800-48310000 Weak transcription NH-A brain
47 chr16:48304800-48312000 Weak transcription A549 lung
48 chr16:48304800-48313200 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr16:48304800-48313200 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr16:48304800-48318400 Weak transcription Duodenum Smooth Muscle Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015