Variant report
| Variant | rs58952249 |
|---|---|
| Chromosome Location | chr16:48299539-48299540 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr16:48279400-48312600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr16:48279600-48311200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr16:48279600-48320200 | Weak transcription | Spleen | Spleen |
| 4 | chr16:48280400-48309400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr16:48280800-48304000 | Weak transcription | Hela-S3 | cervix |
| 6 | chr16:48281400-48313200 | Weak transcription | Right Atrium | heart |
| 7 | chr16:48281800-48313200 | Weak transcription | Psoas Muscle | Psoas |
| 8 | chr16:48285200-48309600 | Strong transcription | HepG2 | liver |
| 9 | chr16:48285800-48306800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 10 | chr16:48285800-48309600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr16:48286000-48300800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr16:48286000-48300800 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 13 | chr16:48286000-48300800 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 14 | chr16:48286000-48301200 | Strong transcription | Dnd41 | blood |
| 15 | chr16:48286000-48301400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 16 | chr16:48286000-48301600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 17 | chr16:48286000-48301600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 18 | chr16:48286000-48313200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 19 | chr16:48286200-48301200 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 20 | chr16:48286200-48301400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 21 | chr16:48286200-48301400 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 22 | chr16:48287200-48302000 | Strong transcription | Placenta | Placenta |
| 23 | chr16:48287400-48320200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr16:48288800-48299600 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 25 | chr16:48289400-48309400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 26 | chr16:48289400-48313200 | Weak transcription | Gastric | stomach |
| 27 | chr16:48289400-48320400 | Weak transcription | Esophagus | oesophagus |
| 28 | chr16:48289800-48306800 | Weak transcription | Aorta | Aorta |
| 29 | chr16:48290600-48300400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr16:48290600-48313800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 31 | chr16:48290800-48303800 | Weak transcription | Stomach Mucosa | stomach |
| 32 | chr16:48290800-48306000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 33 | chr16:48291600-48299800 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 34 | chr16:48291600-48301200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 35 | chr16:48291600-48305200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 36 | chr16:48291600-48309400 | Strong transcription | Fetal Intestine Large | intestine |
| 37 | chr16:48291800-48300800 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 38 | chr16:48292200-48300600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 39 | chr16:48292200-48303800 | Weak transcription | Fetal Intestine Small | intestine |
| 40 | chr16:48292200-48306800 | Weak transcription | Right Ventricle | heart |
| 41 | chr16:48292200-48313200 | Weak transcription | Pancreas | Pancrea |
| 42 | chr16:48292400-48299600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr16:48292400-48301800 | Strong transcription | HSMM | muscle |
| 44 | chr16:48293000-48301200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 45 | chr16:48293400-48300800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 46 | chr16:48293800-48309000 | Strong transcription | Liver | Liver |
| 47 | chr16:48293800-48320400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 48 | chr16:48294000-48305800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 49 | chr16:48294800-48320400 | Weak transcription | Lung | lung |
| 50 | chr16:48296400-48299800 | Strong transcription | Left Ventricle | heart |
