Variant report
Variant | rs74016322 |
---|---|
Chromosome Location | chr16:48270731-48270732 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No data |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr16:48269492..48271775-chr16:48398713..48400285,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ABCC11 | TF binding region |
ENSG00000196470 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs13339188 | 1.00[AMR][1000 genomes] |
rs16945928 | 0.87[AFR][1000 genomes] |
rs16946016 | 1.00[AMR][1000 genomes] |
rs16946018 | 1.00[AMR][1000 genomes] |
rs16946020 | 1.00[AMR][1000 genomes] |
rs16946022 | 1.00[AMR][1000 genomes] |
rs16946024 | 1.00[AMR][1000 genomes] |
rs16946028 | 1.00[AMR][1000 genomes] |
rs16946031 | 1.00[AMR][1000 genomes] |
rs16946033 | 1.00[AMR][1000 genomes] |
rs16946035 | 1.00[AMR][1000 genomes] |
rs16946042 | 1.00[AMR][1000 genomes] |
rs16946044 | 1.00[AMR][1000 genomes] |
rs16946046 | 1.00[AMR][1000 genomes] |
rs16946047 | 1.00[AMR][1000 genomes] |
rs16946049 | 1.00[AMR][1000 genomes] |
rs16946050 | 1.00[AMR][1000 genomes] |
rs16946055 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16946056 | 1.00[AMR][1000 genomes] |
rs16946077 | 1.00[AMR][1000 genomes] |
rs16946084 | 1.00[AMR][1000 genomes] |
rs16946088 | 1.00[AMR][1000 genomes] |
rs16946097 | 1.00[AMR][1000 genomes] |
rs16946106 | 1.00[AMR][1000 genomes] |
rs16946113 | 1.00[AMR][1000 genomes] |
rs16946115 | 1.00[AMR][1000 genomes] |
rs16946118 | 1.00[AMR][1000 genomes] |
rs16946120 | 1.00[AMR][1000 genomes] |
rs16946145 | 1.00[AMR][1000 genomes] |
rs16946162 | 1.00[AMR][1000 genomes] |
rs2046528 | 1.00[AMR][1000 genomes] |
rs2046529 | 1.00[AMR][1000 genomes] |
rs2046530 | 1.00[AMR][1000 genomes] |
rs2160564 | 1.00[AMR][1000 genomes] |
rs2353650 | 1.00[AMR][1000 genomes] |
rs34437640 | 1.00[AMR][1000 genomes] |
rs35730749 | 1.00[AMR][1000 genomes] |
rs4619404 | 1.00[AMR][1000 genomes] |
rs55650659 | 1.00[AMR][1000 genomes] |
rs55650780 | 1.00[AMR][1000 genomes] |
rs55727534 | 1.00[AMR][1000 genomes] |
rs55759468 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs55767683 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs55791428 | 1.00[AMR][1000 genomes] |
rs55894153 | 1.00[AMR][1000 genomes] |
rs55939380 | 1.00[AMR][1000 genomes] |
rs55945004 | 1.00[AMR][1000 genomes] |
rs56006148 | 1.00[AMR][1000 genomes] |
rs56039807 | 1.00[AMR][1000 genomes] |
rs56056936 | 1.00[AMR][1000 genomes] |
rs56068904 | 1.00[AMR][1000 genomes] |
rs56153325 | 1.00[AMR][1000 genomes] |
rs56183549 | 1.00[AMR][1000 genomes] |
rs56210528 | 1.00[AMR][1000 genomes] |
rs56252717 | 1.00[AMR][1000 genomes] |
rs56270052 | 1.00[AMR][1000 genomes] |
rs56379814 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs56403551 | 1.00[AMR][1000 genomes] |
rs56739366 | 1.00[AMR][1000 genomes] |
rs57031394 | 1.00[AMR][1000 genomes] |
rs57045758 | 1.00[AMR][1000 genomes] |
rs57276104 | 1.00[AMR][1000 genomes] |
rs57435271 | 1.00[AMR][1000 genomes] |
rs57646139 | 1.00[AMR][1000 genomes] |
rs57760532 | 1.00[AMR][1000 genomes] |
rs57815195 | 1.00[AMR][1000 genomes] |
rs57850865 | 1.00[AMR][1000 genomes] |
rs57858756 | 1.00[AMR][1000 genomes] |
rs58068024 | 1.00[AMR][1000 genomes] |
rs58095119 | 1.00[AMR][1000 genomes] |
rs58315149 | 1.00[AMR][1000 genomes] |
rs58405777 | 1.00[AMR][1000 genomes] |
rs58531648 | 1.00[AMR][1000 genomes] |
rs58909828 | 1.00[AMR][1000 genomes] |
rs58952249 | 1.00[AMR][1000 genomes] |
rs59077393 | 1.00[AMR][1000 genomes] |
rs59103644 | 1.00[AMR][1000 genomes] |
rs59174783 | 1.00[AMR][1000 genomes] |
rs59247940 | 1.00[AMR][1000 genomes] |
rs59295735 | 1.00[AMR][1000 genomes] |
rs59382226 | 1.00[AMR][1000 genomes] |
rs59893238 | 1.00[AMR][1000 genomes] |
rs59966044 | 1.00[AMR][1000 genomes] |
rs60162759 | 1.00[AMR][1000 genomes] |
rs60230358 | 1.00[AMR][1000 genomes] |
rs60461572 | 1.00[AMR][1000 genomes] |
rs60494112 | 1.00[AMR][1000 genomes] |
rs60659794 | 1.00[AMR][1000 genomes] |
rs60731420 | 1.00[AMR][1000 genomes] |
rs60791230 | 1.00[AMR][1000 genomes] |
rs60944057 | 1.00[AMR][1000 genomes] |
rs60962209 | 1.00[AMR][1000 genomes] |
rs60983423 | 1.00[AMR][1000 genomes] |
rs61055548 | 1.00[AMR][1000 genomes] |
rs61173366 | 1.00[AMR][1000 genomes] |
rs61238817 | 1.00[AMR][1000 genomes] |
rs61528456 | 1.00[AMR][1000 genomes] |
rs74016321 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs74016323 | 1.00[AMR][1000 genomes] |
rs74016324 | 1.00[AMR][1000 genomes] |
rs74016326 | 1.00[AMR][1000 genomes] |
rs74016331 | 1.00[AMR][1000 genomes] |
rs74016333 | 1.00[AMR][1000 genomes] |
rs74016334 | 1.00[AMR][1000 genomes] |
rs74016335 | 1.00[AMR][1000 genomes] |
rs74016337 | 1.00[AMR][1000 genomes] |
rs74016338 | 1.00[AMR][1000 genomes] |
rs74016339 | 1.00[AMR][1000 genomes] |
rs74016340 | 1.00[AMR][1000 genomes] |
rs74016341 | 1.00[AMR][1000 genomes] |
rs74016342 | 1.00[AMR][1000 genomes] |
rs74016343 | 1.00[AMR][1000 genomes] |
rs74016344 | 1.00[AMR][1000 genomes] |
rs74016345 | 1.00[AMR][1000 genomes] |
rs74016346 | 1.00[AMR][1000 genomes] |
rs74016347 | 1.00[AMR][1000 genomes] |
rs74016348 | 1.00[AMR][1000 genomes] |
rs74016349 | 1.00[AMR][1000 genomes] |
rs74016350 | 1.00[AMR][1000 genomes] |
rs74016351 | 1.00[AMR][1000 genomes] |
rs74016352 | 1.00[AMR][1000 genomes] |
rs74016353 | 1.00[AMR][1000 genomes] |
rs74016355 | 1.00[AMR][1000 genomes] |
rs74016356 | 0.88[AFR][1000 genomes] |
rs74016357 | 1.00[AMR][1000 genomes] |
rs74016358 | 1.00[AMR][1000 genomes] |
rs74016362 | 1.00[AMR][1000 genomes] |
rs74016363 | 1.00[AMR][1000 genomes] |
rs74016367 | 1.00[AMR][1000 genomes] |
rs74016372 | 1.00[AMR][1000 genomes] |
rs74016375 | 1.00[AMR][1000 genomes] |
rs74016376 | 1.00[AMR][1000 genomes] |
rs74016377 | 1.00[AMR][1000 genomes] |
rs74016378 | 1.00[AMR][1000 genomes] |
rs74016379 | 1.00[AMR][1000 genomes] |
rs74016381 | 1.00[AMR][1000 genomes] |
rs74016382 | 1.00[AMR][1000 genomes] |
rs74016383 | 1.00[AMR][1000 genomes] |
rs74016384 | 1.00[AMR][1000 genomes] |
rs74016385 | 1.00[AMR][1000 genomes] |
rs74016386 | 1.00[AMR][1000 genomes] |
rs74016387 | 1.00[AMR][1000 genomes] |
rs74016388 | 1.00[AMR][1000 genomes] |
rs74016389 | 1.00[AMR][1000 genomes] |
rs74016390 | 1.00[AMR][1000 genomes] |
rs74016391 | 1.00[AMR][1000 genomes] |
rs74016392 | 1.00[AMR][1000 genomes] |
rs74016393 | 1.00[AMR][1000 genomes] |
rs74016394 | 1.00[AMR][1000 genomes] |
rs74016396 | 1.00[AMR][1000 genomes] |
rs74016397 | 1.00[AMR][1000 genomes] |
rs74016398 | 1.00[AMR][1000 genomes] |
rs74016399 | 1.00[AMR][1000 genomes] |
rs74016400 | 1.00[AMR][1000 genomes] |
rs74016401 | 1.00[AMR][1000 genomes] |
rs74016402 | 1.00[AMR][1000 genomes] |
rs74017903 | 1.00[AMR][1000 genomes] |
rs74017904 | 1.00[AMR][1000 genomes] |
rs74017905 | 1.00[AMR][1000 genomes] |
rs74017907 | 1.00[AMR][1000 genomes] |
rs74017908 | 1.00[AMR][1000 genomes] |
rs74017909 | 1.00[AMR][1000 genomes] |
rs74017910 | 1.00[AMR][1000 genomes] |
rs74017913 | 1.00[AMR][1000 genomes] |
rs74017914 | 1.00[AMR][1000 genomes] |
rs74017917 | 1.00[AMR][1000 genomes] |
rs74017920 | 1.00[AMR][1000 genomes] |
rs74017922 | 1.00[AMR][1000 genomes] |
rs74017923 | 1.00[AMR][1000 genomes] |
rs74017924 | 1.00[AMR][1000 genomes] |
rs74017927 | 1.00[AMR][1000 genomes] |
rs74017928 | 1.00[AMR][1000 genomes] |
rs74017929 | 1.00[AMR][1000 genomes] |
rs74017930 | 1.00[AMR][1000 genomes] |
rs74017931 | 1.00[AMR][1000 genomes] |
rs74017932 | 1.00[AMR][1000 genomes] |
rs74017933 | 1.00[AMR][1000 genomes] |
rs74017934 | 1.00[AMR][1000 genomes] |
rs74017935 | 1.00[AMR][1000 genomes] |
rs74017938 | 1.00[AMR][1000 genomes] |
rs74017943 | 1.00[AMR][1000 genomes] |
rs74017945 | 1.00[AMR][1000 genomes] |
rs74017946 | 1.00[AMR][1000 genomes] |
rs74017947 | 1.00[AMR][1000 genomes] |
rs74017948 | 1.00[AMR][1000 genomes] |
rs74017950 | 1.00[AMR][1000 genomes] |
rs74017951 | 1.00[AMR][1000 genomes] |
rs74017952 | 1.00[AMR][1000 genomes] |
rs74017955 | 1.00[AMR][1000 genomes] |
rs74017956 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1059259 | chr16:48113396-48304404 | Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv542916 | chr16:48113396-48304404 | Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
3 | nsv1061316 | chr16:48264175-48594219 | Weak transcription Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 38 gene(s) | inside rSNPs | diseases |
4 | esv1821072 | chr16:48268318-48504364 | Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 34 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:48269600-48272600 | Enhancers | Liver | Liver |
2 | chr16:48270000-48270800 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
3 | chr16:48270000-48270800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
4 | chr16:48270000-48272400 | Enhancers | Fetal Heart | heart |
5 | chr16:48270200-48277600 | Weak transcription | Pancreas | Pancrea |
6 | chr16:48270400-48272200 | Weak transcription | Duodenum Mucosa | Duodenum |
7 | chr16:48270400-48272600 | Enhancers | HepG2 | liver |