The 2.0 version of rSNPBase

Variant report

Variant rs16946113
Chromosome Location chr16:48375853-48375854
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48338600-48381200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr16:48347600-48384800 Weak transcription Fetal Kidney kidney
3 chr16:48352200-48395400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr16:48355800-48384800 Weak transcription Small Intestine intestine
5 chr16:48363400-48383400 Weak transcription HUVEC blood vessel
6 chr16:48364400-48378800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr16:48365000-48381400 Weak transcription Pancreas Pancrea
8 chr16:48365000-48388200 Weak transcription Right Atrium heart
9 chr16:48365200-48378600 Strong transcription Primary T cells fromperipheralblood blood
10 chr16:48365200-48392400 Strong transcription Liver Liver
11 chr16:48365800-48377600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr16:48366400-48377400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
13 chr16:48366800-48377400 Strong transcription Dnd41 blood
14 chr16:48367000-48378600 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr16:48367000-48387000 Strong transcription Monocytes-CD14+_RO01746 blood
16 chr16:48367200-48387000 Strong transcription Primary T cells from cord blood blood
17 chr16:48367400-48378600 Strong transcription Primary monocytes fromperipheralblood blood
18 chr16:48367400-48387000 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr16:48367600-48377000 Strong transcription Rectal Mucosa Donor 29 rectum
20 chr16:48367600-48377400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
21 chr16:48367600-48378200 Strong transcription Primary B cells from cord blood blood
22 chr16:48367600-48378600 Strong transcription Primary B cells from peripheral blood blood
23 chr16:48367600-48378800 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr16:48367800-48377200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr16:48367800-48377200 Strong transcription Duodenum Mucosa Duodenum
26 chr16:48367800-48378600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr16:48367800-48387200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr16:48368000-48377000 Strong transcription Primary T helper naive cells fromperipheralblood blood
29 chr16:48368200-48377000 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr16:48368200-48378000 Strong transcription Adipose Nuclei Adipose
31 chr16:48368200-48378200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr16:48368200-48378600 Strong transcription HepG2 liver
33 chr16:48368800-48381800 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr16:48368800-48384600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr16:48368800-48386600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr16:48368800-48387400 Weak transcription Stomach Mucosa stomach
37 chr16:48369000-48381400 Weak transcription Colonic Mucosa Colon
38 chr16:48369400-48381400 Weak transcription Brain Germinal Matrix brain
39 chr16:48369800-48383600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr16:48370000-48381400 Weak transcription HMEC breast
41 chr16:48370000-48398600 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr16:48370200-48376200 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr16:48370200-48380400 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr16:48370400-48377400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr16:48370400-48381200 Weak transcription Brain Angular Gyrus brain
46 chr16:48370400-48389800 Weak transcription Psoas Muscle Psoas
47 chr16:48370400-48395000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr16:48370400-48399200 Weak transcription H9 Cell Line embryonic stem cell
49 chr16:48370600-48399200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr16:48370800-48377000 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015