The 2.0 version of rSNPBase

Variant report

Variant rs61528456
Chromosome Location chr16:48338500-48338501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48321400-48343200 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr16:48321600-48340400 Strong transcription Primary T cells from cord blood blood
3 chr16:48321600-48341600 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr16:48321600-48341800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr16:48321600-48342000 Strong transcription Primary T helper cells fromperipheralblood blood
6 chr16:48321800-48341600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr16:48321800-48344800 Weak transcription Fetal Brain Male brain
8 chr16:48322800-48339800 Strong transcription Primary B cells from cord blood blood
9 chr16:48323400-48341600 Weak transcription H1 Cell Line embryonic stem cell
10 chr16:48325000-48350800 Weak transcription NHLF lung
11 chr16:48326600-48341600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr16:48327400-48344000 Strong transcription HepG2 liver
13 chr16:48327600-48342000 Strong transcription Fetal Intestine Large intestine
14 chr16:48329200-48341800 Strong transcription Primary monocytes fromperipheralblood blood
15 chr16:48329200-48342200 Strong transcription Duodenum Smooth Muscle Duodenum
16 chr16:48329400-48340800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr16:48329400-48341200 Strong transcription Primary T helper cells PMA-I stimulated --
18 chr16:48329600-48341800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
19 chr16:48329600-48341800 Strong transcription Primary B cells from peripheral blood blood
20 chr16:48329800-48339200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr16:48329800-48341600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr16:48329800-48341800 Strong transcription Primary T cells fromperipheralblood blood
23 chr16:48329800-48341800 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr16:48329800-48343000 Strong transcription Primary neutrophils fromperipheralblood blood
25 chr16:48329800-48344400 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr16:48330000-48339400 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr16:48330000-48340000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr16:48330000-48340000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr16:48330200-48341800 Strong transcription Fetal Lung lung
30 chr16:48330200-48343600 Strong transcription Duodenum Mucosa Duodenum
31 chr16:48330200-48347800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr16:48330400-48344200 Strong transcription Placenta Placenta
33 chr16:48330400-48344800 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr16:48330400-48354600 Weak transcription Stomach Mucosa stomach
35 chr16:48332600-48339200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr16:48333000-48339800 Strong transcription Fetal Thymus thymus
37 chr16:48333000-48340000 Strong transcription Fetal Muscle Trunk muscle
38 chr16:48333000-48343200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr16:48333200-48341800 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr16:48333200-48341800 Strong transcription HSMM muscle
41 chr16:48333200-48344800 Strong transcription Primary T helper naive cells fromperipheralblood blood
42 chr16:48333400-48339000 Strong transcription Primary hematopoietic stem cells blood
43 chr16:48333400-48341600 Strong transcription NHDF-Ad bronchial
44 chr16:48333600-48342200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
45 chr16:48333600-48345600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr16:48334600-48350800 Weak transcription NH-A brain
47 chr16:48334800-48340200 Strong transcription NHEK skin
48 chr16:48334800-48341400 Strong transcription Osteobl bone
49 chr16:48334800-48341600 Strong transcription Dnd41 blood
50 chr16:48334800-48361400 Strong transcription Liver Liver

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Last update: Aug 31, 2015