Variant report
| Variant | rs16946097 |
|---|---|
| Chromosome Location | chr16:48350927-48350928 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr16:48330400-48354600 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr16:48334800-48361400 | Strong transcription | Liver | Liver |
| 3 | chr16:48338000-48351000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr16:48338600-48352600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr16:48338600-48352600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr16:48338600-48381200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr16:48339400-48368000 | Weak transcription | Colonic Mucosa | Colon |
| 8 | chr16:48342200-48368000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr16:48343400-48375600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr16:48344600-48368200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 11 | chr16:48345000-48351600 | Weak transcription | Small Intestine | intestine |
| 12 | chr16:48345200-48351000 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 13 | chr16:48345200-48351000 | Weak transcription | HMEC | breast |
| 14 | chr16:48345200-48351200 | Weak transcription | HSMM | muscle |
| 15 | chr16:48345600-48351200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 16 | chr16:48345800-48351000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 17 | chr16:48345800-48351400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 18 | chr16:48345800-48351600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 19 | chr16:48345800-48352600 | Weak transcription | Fetal Heart | heart |
| 20 | chr16:48345800-48363200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 21 | chr16:48346000-48352400 | Weak transcription | Brain Angular Gyrus | brain |
| 22 | chr16:48346000-48355000 | Weak transcription | Psoas Muscle | Psoas |
| 23 | chr16:48346600-48351400 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 24 | chr16:48346600-48364200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 25 | chr16:48346600-48368200 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr16:48346800-48351600 | Weak transcription | Spleen | Spleen |
| 27 | chr16:48346800-48352400 | Weak transcription | Fetal Brain Male | brain |
| 28 | chr16:48346800-48368200 | Weak transcription | A549 | lung |
| 29 | chr16:48347000-48351000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr16:48347000-48351000 | Weak transcription | Thymus | Thymus |
| 31 | chr16:48347000-48351600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 32 | chr16:48347000-48351600 | Weak transcription | Right Ventricle | heart |
| 33 | chr16:48347000-48351800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 34 | chr16:48347000-48352000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 35 | chr16:48347000-48352200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 36 | chr16:48347000-48352200 | Weak transcription | Lung | lung |
| 37 | chr16:48347000-48352400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 38 | chr16:48347000-48353000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 39 | chr16:48347000-48368000 | Weak transcription | Hela-S3 | cervix |
| 40 | chr16:48347000-48368000 | Weak transcription | K562 | blood |
| 41 | chr16:48347000-48368200 | Weak transcription | Placenta | Placenta |
| 42 | chr16:48347000-48368200 | Weak transcription | Gastric | stomach |
| 43 | chr16:48347000-48368400 | Weak transcription | Esophagus | oesophagus |
| 44 | chr16:48347200-48351600 | Weak transcription | Fetal Thymus | thymus |
| 45 | chr16:48347400-48351600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 46 | chr16:48347400-48360800 | Weak transcription | Fetal Intestine Small | intestine |
| 47 | chr16:48347400-48368200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 48 | chr16:48347600-48351000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 49 | chr16:48347600-48351000 | Weak transcription | Brain Anterior Caudate | brain |
| 50 | chr16:48347600-48351000 | Weak transcription | Brain Hippocampus Middle | brain |
