The 2.0 version of rSNPBase

Variant report

Variant rs55767683
Chromosome Location chr16:48305567-48305568
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48279400-48312600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:48279600-48311200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr16:48279600-48320200 Weak transcription Spleen Spleen
4 chr16:48280400-48309400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr16:48281400-48313200 Weak transcription Right Atrium heart
6 chr16:48281800-48313200 Weak transcription Psoas Muscle Psoas
7 chr16:48285200-48309600 Strong transcription HepG2 liver
8 chr16:48285800-48306800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr16:48285800-48309600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr16:48286000-48313200 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr16:48287400-48320200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr16:48289400-48309400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr16:48289400-48313200 Weak transcription Gastric stomach
14 chr16:48289400-48320400 Weak transcription Esophagus oesophagus
15 chr16:48289800-48306800 Weak transcription Aorta Aorta
16 chr16:48290600-48313800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr16:48290800-48306000 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr16:48291600-48309400 Strong transcription Fetal Intestine Large intestine
19 chr16:48292200-48306800 Weak transcription Right Ventricle heart
20 chr16:48292200-48313200 Weak transcription Pancreas Pancrea
21 chr16:48293800-48309000 Strong transcription Liver Liver
22 chr16:48293800-48320400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr16:48294000-48305800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr16:48294800-48320400 Weak transcription Lung lung
25 chr16:48297200-48323200 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr16:48297600-48305800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr16:48297600-48305800 Weak transcription Colon Smooth Muscle Colon
28 chr16:48297600-48311000 Weak transcription Colonic Mucosa Colon
29 chr16:48297600-48313200 Weak transcription K562 blood
30 chr16:48297600-48318600 Strong transcription Primary B cells from peripheral blood blood
31 chr16:48297600-48319800 Weak transcription H1 Cell Line embryonic stem cell
32 chr16:48297600-48321000 Weak transcription Fetal Brain Male brain
33 chr16:48297800-48311400 Weak transcription HSMMtube muscle
34 chr16:48297800-48312200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr16:48297800-48313200 Weak transcription H9 Cell Line embryonic stem cell
36 chr16:48297800-48313200 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr16:48297800-48313200 Weak transcription NHEK skin
38 chr16:48297800-48319800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr16:48297800-48320800 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr16:48297800-48320800 Weak transcription Brain Germinal Matrix brain
41 chr16:48297800-48320800 Weak transcription Placenta Amnion Placenta Amnion
42 chr16:48297800-48320800 Weak transcription Small Intestine intestine
43 chr16:48298000-48309600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr16:48299000-48320400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr16:48299200-48305800 Weak transcription Brain Cingulate Gyrus brain
46 chr16:48299400-48306600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr16:48300200-48306200 Strong transcription Rectal Mucosa Donor 31 rectum
48 chr16:48300200-48320200 Weak transcription Fetal Stomach stomach
49 chr16:48300600-48306600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr16:48301200-48310200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015