Variant report

Variant	rs74016321
Chromosome Location	chr16:48263846-48263847
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 191 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:189)

rs_ID	r²[population]
rs16945928	0.87[AFR][1000 genomes]
rs16946016	1.00[AMR][1000 genomes]
rs16946018	1.00[AMR][1000 genomes]
rs16946020	1.00[AMR][1000 genomes]
rs16946022	1.00[AMR][1000 genomes]
rs16946024	1.00[AMR][1000 genomes]
rs16946028	1.00[AMR][1000 genomes]
rs16946031	1.00[AMR][1000 genomes]
rs16946033	1.00[AMR][1000 genomes]
rs16946035	1.00[AMR][1000 genomes]
rs16946042	1.00[AMR][1000 genomes]
rs16946044	1.00[AMR][1000 genomes]
rs16946046	1.00[AMR][1000 genomes]
rs16946047	1.00[AMR][1000 genomes]
rs16946049	1.00[AMR][1000 genomes]
rs16946050	1.00[AMR][1000 genomes]
rs16946055	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16946056	1.00[AMR][1000 genomes]
rs16946077	1.00[AMR][1000 genomes]
rs16946084	1.00[AMR][1000 genomes]
rs16946088	1.00[AMR][1000 genomes]
rs16946097	1.00[AMR][1000 genomes]
rs16946106	1.00[AMR][1000 genomes]
rs16946113	1.00[AMR][1000 genomes]
rs16946115	1.00[AMR][1000 genomes]
rs16946118	1.00[AMR][1000 genomes]
rs16946120	1.00[AMR][1000 genomes]
rs16946145	1.00[AMR][1000 genomes]
rs16946162	1.00[AMR][1000 genomes]
rs2046528	1.00[AMR][1000 genomes]
rs2046529	1.00[AMR][1000 genomes]
rs2046530	1.00[AMR][1000 genomes]
rs2160564	1.00[AMR][1000 genomes]
rs2353650	1.00[AMR][1000 genomes]
rs34437640	1.00[AMR][1000 genomes]
rs35730749	1.00[AMR][1000 genomes]
rs4619404	1.00[AMR][1000 genomes]
rs55650659	1.00[AMR][1000 genomes]
rs55650780	1.00[AMR][1000 genomes]
rs55727534	1.00[AMR][1000 genomes]
rs55759468	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55767683	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55791428	1.00[AMR][1000 genomes]
rs55894153	1.00[AMR][1000 genomes]
rs55939380	1.00[AMR][1000 genomes]
rs55945004	1.00[AMR][1000 genomes]
rs56006148	1.00[AMR][1000 genomes]
rs56039807	1.00[AMR][1000 genomes]
rs56056936	1.00[AMR][1000 genomes]
rs56068904	1.00[AMR][1000 genomes]
rs56153325	1.00[AMR][1000 genomes]
rs56183549	1.00[AMR][1000 genomes]
rs56210528	1.00[AMR][1000 genomes]
rs56252717	1.00[AMR][1000 genomes]
rs56270052	1.00[AMR][1000 genomes]
rs56379814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56403551	1.00[AMR][1000 genomes]
rs56739366	1.00[AMR][1000 genomes]
rs57031394	1.00[AMR][1000 genomes]
rs57045758	1.00[AMR][1000 genomes]
rs57276104	1.00[AMR][1000 genomes]
rs57435271	1.00[AMR][1000 genomes]
rs57646139	1.00[AMR][1000 genomes]
rs57760532	1.00[AMR][1000 genomes]
rs57815195	1.00[AMR][1000 genomes]
rs57850865	1.00[AMR][1000 genomes]
rs57858756	1.00[AMR][1000 genomes]
rs58068024	1.00[AMR][1000 genomes]
rs58095119	1.00[AMR][1000 genomes]
rs58315149	1.00[AMR][1000 genomes]
rs58405777	1.00[AMR][1000 genomes]
rs58531648	1.00[AMR][1000 genomes]
rs58909828	1.00[AMR][1000 genomes]
rs58952249	1.00[AMR][1000 genomes]
rs59077393	1.00[AMR][1000 genomes]
rs59103644	1.00[AMR][1000 genomes]
rs59174783	1.00[AMR][1000 genomes]
rs59247940	1.00[AMR][1000 genomes]
rs59295735	1.00[AMR][1000 genomes]
rs59382226	1.00[AMR][1000 genomes]
rs59893238	1.00[AMR][1000 genomes]
rs59966044	1.00[AMR][1000 genomes]
rs60162759	1.00[AMR][1000 genomes]
rs60230358	1.00[AMR][1000 genomes]
rs60461572	1.00[AMR][1000 genomes]
rs60494112	1.00[AMR][1000 genomes]
rs60659794	1.00[AMR][1000 genomes]
rs60731420	1.00[AMR][1000 genomes]
rs60791230	1.00[AMR][1000 genomes]
rs60944057	1.00[AMR][1000 genomes]
rs60962209	1.00[AMR][1000 genomes]
rs60983423	1.00[AMR][1000 genomes]
rs61055548	1.00[AMR][1000 genomes]
rs61173366	1.00[AMR][1000 genomes]
rs61238817	1.00[AMR][1000 genomes]
rs61528456	1.00[AMR][1000 genomes]
rs74016322	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74016323	1.00[AMR][1000 genomes]
rs74016324	1.00[AMR][1000 genomes]
rs74016326	1.00[AMR][1000 genomes]
rs74016331	1.00[AMR][1000 genomes]
rs74016333	1.00[AMR][1000 genomes]
rs74016334	1.00[AMR][1000 genomes]
rs74016335	1.00[AMR][1000 genomes]
rs74016337	1.00[AMR][1000 genomes]
rs74016338	1.00[AMR][1000 genomes]
rs74016339	1.00[AMR][1000 genomes]
rs74016340	1.00[AMR][1000 genomes]
rs74016341	1.00[AMR][1000 genomes]
rs74016342	1.00[AMR][1000 genomes]
rs74016343	1.00[AMR][1000 genomes]
rs74016344	1.00[AMR][1000 genomes]
rs74016345	1.00[AMR][1000 genomes]
rs74016346	1.00[AMR][1000 genomes]
rs74016347	1.00[AMR][1000 genomes]
rs74016348	1.00[AMR][1000 genomes]
rs74016349	1.00[AMR][1000 genomes]
rs74016350	1.00[AMR][1000 genomes]
rs74016351	1.00[AMR][1000 genomes]
rs74016352	1.00[AMR][1000 genomes]
rs74016353	1.00[AMR][1000 genomes]
rs74016355	1.00[AMR][1000 genomes]
rs74016356	0.88[AFR][1000 genomes]
rs74016357	1.00[AMR][1000 genomes]
rs74016358	1.00[AMR][1000 genomes]
rs74016362	1.00[AMR][1000 genomes]
rs74016363	1.00[AMR][1000 genomes]
rs74016367	1.00[AMR][1000 genomes]
rs74016372	1.00[AMR][1000 genomes]
rs74016375	1.00[AMR][1000 genomes]
rs74016376	1.00[AMR][1000 genomes]
rs74016377	1.00[AMR][1000 genomes]
rs74016378	1.00[AMR][1000 genomes]
rs74016379	1.00[AMR][1000 genomes]
rs74016381	1.00[AMR][1000 genomes]
rs74016382	1.00[AMR][1000 genomes]
rs74016383	1.00[AMR][1000 genomes]
rs74016384	1.00[AMR][1000 genomes]
rs74016385	1.00[AMR][1000 genomes]
rs74016386	1.00[AMR][1000 genomes]
rs74016387	1.00[AMR][1000 genomes]
rs74016388	1.00[AMR][1000 genomes]
rs74016389	1.00[AMR][1000 genomes]
rs74016390	1.00[AMR][1000 genomes]
rs74016391	1.00[AMR][1000 genomes]
rs74016392	1.00[AMR][1000 genomes]
rs74016393	1.00[AMR][1000 genomes]
rs74016394	1.00[AMR][1000 genomes]
rs74016396	1.00[AMR][1000 genomes]
rs74016397	1.00[AMR][1000 genomes]
rs74016398	1.00[AMR][1000 genomes]
rs74016399	1.00[AMR][1000 genomes]
rs74016400	1.00[AMR][1000 genomes]
rs74016401	1.00[AMR][1000 genomes]
rs74016402	1.00[AMR][1000 genomes]
rs74017903	1.00[AMR][1000 genomes]
rs74017904	1.00[AMR][1000 genomes]
rs74017905	1.00[AMR][1000 genomes]
rs74017907	1.00[AMR][1000 genomes]
rs74017908	1.00[AMR][1000 genomes]
rs74017909	1.00[AMR][1000 genomes]
rs74017910	1.00[AMR][1000 genomes]
rs74017913	1.00[AMR][1000 genomes]
rs74017914	1.00[AMR][1000 genomes]
rs74017917	1.00[AMR][1000 genomes]
rs74017920	1.00[AMR][1000 genomes]
rs74017922	1.00[AMR][1000 genomes]
rs74017923	1.00[AMR][1000 genomes]
rs74017924	1.00[AMR][1000 genomes]
rs74017927	1.00[AMR][1000 genomes]
rs74017928	1.00[AMR][1000 genomes]
rs74017929	1.00[AMR][1000 genomes]
rs74017930	1.00[AMR][1000 genomes]
rs74017931	1.00[AMR][1000 genomes]
rs74017932	1.00[AMR][1000 genomes]
rs74017933	1.00[AMR][1000 genomes]
rs74017934	1.00[AMR][1000 genomes]
rs74017935	1.00[AMR][1000 genomes]
rs74017938	1.00[AMR][1000 genomes]
rs74017943	1.00[AMR][1000 genomes]
rs74017945	1.00[AMR][1000 genomes]
rs74017946	1.00[AMR][1000 genomes]
rs74017947	1.00[AMR][1000 genomes]
rs74017948	1.00[AMR][1000 genomes]
rs74017950	1.00[AMR][1000 genomes]
rs74017951	1.00[AMR][1000 genomes]
rs74017952	1.00[AMR][1000 genomes]
rs74017955	1.00[AMR][1000 genomes]
rs74017956	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1059259	chr16:48113396-48304404	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv542916	chr16:48113396-48304404	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:48262800-48264200	Enhancers	Liver	Liver
2	chr16:48263000-48264200	Enhancers	Pancreas	Pancrea
3	chr16:48263000-48264400	Enhancers	Gastric	stomach
4	chr16:48263000-48264400	Enhancers	Stomach Mucosa	stomach
5	chr16:48263200-48265400	Weak transcription	A549	lung
6	chr16:48263400-48264200	Flanking Bivalent TSS/Enh	HepG2	liver
7	chr16:48263400-48268400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr16:48263800-48264000	Enhancers	Esophagus	oesophagus
9	chr16:48263800-48264200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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