Variant report
| Variant | rs58315149 |
|---|---|
| Chromosome Location | chr16:48280279-48280280 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr16:48277400-48281400 | Active TSS | GM12878-XiMat | blood |
| 2 | chr16:48278000-48280400 | Active TSS | NHLF | lung |
| 3 | chr16:48278000-48280600 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 4 | chr16:48278600-48280400 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 5 | chr16:48278600-48280400 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 6 | chr16:48278800-48280800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr16:48278800-48281800 | Flanking Active TSS | Liver | Liver |
| 8 | chr16:48279000-48280400 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 9 | chr16:48279000-48280400 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 10 | chr16:48279000-48280400 | Flanking Active TSS | Dnd41 | blood |
| 11 | chr16:48279000-48280400 | Flanking Active TSS | Osteobl | bone |
| 12 | chr16:48279000-48280600 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 13 | chr16:48279000-48287000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr16:48279200-48280400 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 15 | chr16:48279200-48280400 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 16 | chr16:48279200-48280400 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
| 17 | chr16:48279200-48280400 | Weak transcription | Esophagus | oesophagus |
| 18 | chr16:48279200-48280400 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 19 | chr16:48279200-48280400 | Flanking Active TSS | NHEK | skin |
| 20 | chr16:48279200-48280600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 21 | chr16:48279200-48280600 | Enhancers | Stomach Mucosa | stomach |
| 22 | chr16:48279200-48280600 | Flanking Active TSS | HepG2 | liver |
| 23 | chr16:48279200-48280800 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 24 | chr16:48279200-48281600 | Enhancers | Small Intestine | intestine |
| 25 | chr16:48279400-48280400 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 26 | chr16:48279400-48280400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 27 | chr16:48279400-48280800 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr16:48279400-48280800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 29 | chr16:48279400-48281000 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 30 | chr16:48279400-48281200 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 31 | chr16:48279400-48281600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 32 | chr16:48279400-48281800 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 33 | chr16:48279400-48312600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr16:48279600-48280400 | Enhancers | Primary hematopoietic stem cells | blood |
| 35 | chr16:48279600-48280400 | Active TSS | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 36 | chr16:48279600-48280400 | Enhancers | Brain Germinal Matrix | brain |
| 37 | chr16:48279600-48280400 | Enhancers | Colonic Mucosa | Colon |
| 38 | chr16:48279600-48280400 | Enhancers | Fetal Brain Male | brain |
| 39 | chr16:48279600-48280400 | Enhancers | Fetal Heart | heart |
| 40 | chr16:48279600-48280400 | Enhancers | Fetal Stomach | stomach |
| 41 | chr16:48279600-48280400 | Enhancers | Rectal Smooth Muscle | rectum |
| 42 | chr16:48279600-48280400 | Weak transcription | Right Ventricle | heart |
| 43 | chr16:48279600-48280400 | Enhancers | Thymus | Thymus |
| 44 | chr16:48279600-48280400 | Enhancers | HSMMtube | muscle |
| 45 | chr16:48279600-48280400 | Enhancers | HUVEC | blood vessel |
| 46 | chr16:48279600-48280400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 47 | chr16:48279600-48280400 | Enhancers | NH-A | brain |
| 48 | chr16:48279600-48280600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr16:48279600-48280600 | Weak transcription | Lung | lung |
| 50 | chr16:48279600-48280800 | Enhancers | Fetal Intestine Large | intestine |
