Variant report

Variant rs58909828
Chromosome Location chr16:48328547-48328548
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48305200-48328600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr16:48313600-48331800 Strong transcription Liver Liver
3 chr16:48313600-48337200 Weak transcription Gastric stomach
4 chr16:48317400-48336400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr16:48319800-48329000 Strong transcription Primary T cells fromperipheralblood blood
6 chr16:48321200-48330400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr16:48321200-48336400 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr16:48321200-48337200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr16:48321400-48329200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr16:48321400-48329400 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr16:48321400-48329800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr16:48321400-48330000 Weak transcription Placenta Amnion Placenta Amnion
13 chr16:48321400-48333000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr16:48321400-48333400 Weak transcription HSMMtube muscle
15 chr16:48321400-48335800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr16:48321400-48337800 Weak transcription Psoas Muscle Psoas
17 chr16:48321400-48343200 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr16:48321600-48329800 Weak transcription Brain Cingulate Gyrus brain
19 chr16:48321600-48329800 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr16:48321600-48330000 Weak transcription Fetal Kidney kidney
21 chr16:48321600-48330800 Strong transcription Primary T helper naive cells fromperipheralblood blood
22 chr16:48321600-48331000 Weak transcription Thymus Thymus
23 chr16:48321600-48333600 Weak transcription Colon Smooth Muscle Colon
24 chr16:48321600-48335800 Weak transcription Fetal Heart heart
25 chr16:48321600-48337000 Weak transcription Brain Angular Gyrus brain
26 chr16:48321600-48340400 Strong transcription Primary T cells from cord blood blood
27 chr16:48321600-48341600 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr16:48321600-48341800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr16:48321600-48342000 Strong transcription Primary T helper cells fromperipheralblood blood
30 chr16:48321800-48329800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr16:48321800-48341600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr16:48321800-48344800 Weak transcription Fetal Brain Male brain
33 chr16:48322000-48329200 Strong transcription Fetal Muscle Leg muscle
34 chr16:48322000-48330000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr16:48322400-48332400 Strong transcription Adipose Nuclei Adipose
36 chr16:48322600-48333400 Weak transcription K562 blood
37 chr16:48322600-48335200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr16:48322800-48339800 Strong transcription Primary B cells from cord blood blood
39 chr16:48323000-48329600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr16:48323400-48330000 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr16:48323400-48337200 Weak transcription Aorta Aorta
42 chr16:48323400-48341600 Weak transcription H1 Cell Line embryonic stem cell
43 chr16:48323600-48336400 Weak transcription Right Ventricle heart
44 chr16:48323600-48337200 Weak transcription H9 Cell Line embryonic stem cell
45 chr16:48324400-48330400 Weak transcription Ovary ovary
46 chr16:48324600-48330000 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr16:48324800-48328600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr16:48324800-48329200 Weak transcription Placenta Placenta
49 chr16:48324800-48330000 Weak transcription Lung lung
50 chr16:48324800-48331000 Weak transcription Esophagus oesophagus

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